CK934395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_CITSI (DNA-directed RNA polymerase subunit beta OS=Citrus sinensis GN=rpoB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_TOBAC (DNA-directed RNA polymerase subunit beta OS=Nicotiana tabacum GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_SOLTU (DNA-directed RNA polymerase subunit beta OS=Solanum tuberosum GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_SOLLC (DNA-directed RNA polymerase subunit beta OS=Solanum lycopersicum GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_SOLBU (DNA-directed RNA polymerase subunit beta OS=Solanum bulbocastanum GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_NICTO (DNA-directed RNA polymerase subunit beta OS=Nicotiana tomentosiformis GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_NICSY (DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ATRBE (DNA-directed RNA polymerase subunit beta OS=Atropa belladonna GN=rpoB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN G+STIPG NQIQFEGFCRFIDQGLTEELYKFPKIEDTD Sbjct: 1 MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_JASNU (DNA-directed RNA polymerase subunit beta OS=Jasminum nudiflorum GN=rpoB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN GMSTIPGLNQIQFEGFCRFIDQGLTEEL KFPKIEDTD Sbjct: 1 MLGDGNEGMSTIPGLNQIQFEGFCRFIDQGLTEELSKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_EUCGG (DNA-directed RNA polymerase subunit beta OS=Eucalyptus globulus subsp. globulus GN=rpoB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 42/45 (93.33%), Postives = 42/45 (93.33%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDGN GMSTIPG NQIQFEGFCRFIDQGLTEEL KFPKIEDTD Sbjct: 1 MLGDGNEGMSTIPGFNQIQFEGFCRFIDQGLTEELIKFPKIEDTD 45 The following BLAST results are available for this feature:
BLAST of CK934395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934395 ID=CK934395; Name=CK934395; organism=Citrus sinensis; type=EST; length=724bpback to top |