CK934395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_SACOF (DNA-directed RNA polymerase subunit beta OS=Saccharum officinarum GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_SACHY (DNA-directed RNA polymerase subunit beta OS=Saccharum hybrid GN=rpoB PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ORYSJ (DNA-directed RNA polymerase subunit beta OS=Oryza sativa subsp. japonica GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ORYSI (DNA-directed RNA polymerase subunit beta OS=Oryza sativa subsp. indica GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ORYSA (DNA-directed RNA polymerase subunit beta OS=Oryza sativa GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ORYNI (DNA-directed RNA polymerase subunit beta OS=Oryza nivara GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_MAIZE (DNA-directed RNA polymerase subunit beta OS=Zea mays GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML +GN GMSTIPG +QIQFEGFCRFI+QGL EEL KFP I+D D Sbjct: 1 MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_CALFG (DNA-directed RNA polymerase subunit beta OS=Calycanthus floridus var. glaucus GN=rpoB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 3 Query: 612 MSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 M TIPG +QIQFEGFCRFIDQGLTEEL+KFPKIEDTD Sbjct: 1 MPTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTD 37
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_HELAN (DNA-directed RNA polymerase subunit beta OS=Helianthus annuus GN=rpoB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 3 Query: 612 MSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MSTIPG NQIQFEGFCRFIDQGL EEL KFPKIEDT+ Sbjct: 1 MSTIPGFNQIQFEGFCRFIDQGLAEELSKFPKIEDTN 37
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ARATH (DNA-directed RNA polymerase subunit beta OS=Arabidopsis thaliana GN=rpoB PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 35/45 (77.78%), Postives = 35/45 (77.78%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGD G S IPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDEKEGTSAIPGFNQIQFEGFYRFIDQGLIEELAKFPKIEDID 45 The following BLAST results are available for this feature:
BLAST of CK934395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934395 ID=CK934395; Name=CK934395; organism=Citrus sinensis; type=EST; length=724bpback to top |