CK934401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14 Identity = 57/137 (41.61%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV W AG EG YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ IK+ RLAM + F +QA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQA 233
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14 Identity = 57/139 (41.01%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALTG--------VAWQDAGKVELVEGS-SYLGQPLPF---SLTTLIWIEVIVIGYIEYQRNAELDPVKR---LYPGG-YFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 R E+IHGRWAMLG LG I E L W AG +G YLG P S+ ++ +V+++G +E R L V LYPGG YFDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 93 RALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQA 231
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.291e-14 Identity = 59/140 (42.14%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E A GV W AG EG YLG P +++ I +V+++G +E R A +DP LYPGG FDPLGLA DP L++ E K+ RLAM + F IQA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQA 233
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14 Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GVAWQDA------GKVELVEGSSYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L GV + +A ++ G YLG P +++ I +V+++G +E R A + V LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.202e-14 Identity = 57/140 (40.71%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 R+ E+IH RW MLG LG + E A GV W AG EG YLG P +++ I +V+++G +E R A +DP LYPGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 96 RKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14 Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P +++ I +VI++G +E R A + V LYPGG FDPLGLA P L++ E+K+ RLAM + F + A Sbjct: 58 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPA 194
BLAST of CK934401 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13 Identity = 56/140 (40.00%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 457 RECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVIVIGYIEYQR------NAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQA 825 RE E+IH RWAMLG LG + E L W AG EG Y G P +++ I +V+++G IE R LDP L PGG FDPLGLA DP L++ EIK+ RLAM + F +QA Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDP---LLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQA 232 The following BLAST results are available for this feature:
BLAST of CK934401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934401 ID=CK934401; Name=CK934401; organism=Citrus sinensis; type=EST; length=832bpback to top |