CK934655

Overview
NameCK934655
Unique NameCK934655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.775e-14
Identity = 43/65 (66.15%), Postives = 46/65 (70.77%), Query Frame = 3
Query:   84 IFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            +F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  205 VFGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 265          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 3
Query:    3 ANPM-GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 275
            A PM GE  ++C  +  MP+V+F I    + LS   Y L       + C SGF   D+ PP GPLWILGDVF+  +++VFD G  R+G A A
Sbjct:  303 ATPMDGEYAVECENLNIMPDVTFVINGVPYTLSATAYTLPDFVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRQFYSVFDRGSNRVGLAPA 394          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 3.028e-14
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  GE +I C  I ++P++ FTI    + LSP  YIL+  +     C SGF   D+P   G LWILGDVF+  Y+TVFD    ++G A  A
Sbjct:  299 NSDGEMVISCSSIDSLPDIVFTINGVQYPLSPSAYILQDDDS----CTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 385          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 3
Query:   24 IIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 275
            +++C ++PT+P++SF +G + + LS   Y+ K      ++CI      D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  318 VVNCSQVPTLPDISFYLGGRTYTLSNMDYVQKNPFRNDDLCILALQGLDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:   87 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  207 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 266          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:   87 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  222 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 281          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14
Identity = 43/64 (67.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:   87 FNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            F L+PEQYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  165 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 224          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  G+ ++ C  I ++P++ FTI    + L    YIL+  +     C SGF   D+P P G LWILGDVF+  Y  VFD G  R+G A  A
Sbjct:  301 NANGQMVVSCSSIQSLPDIVFTINGIQYPLPASAYILQNQQD----CTSGFQGMDIPTPSGELWILGDVFIRQYFAVFDRGNNRVGLAPVA 387          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  G+ +I C  I ++P++ FTI    + L P  YIL++ +G    C+SGF   +LP   G LWILGDVF+  Y  VFD    ++G A  A
Sbjct:  300 NSYGQMVISCSAINSLPDIVFTINGIQYPLPPSAYILQSQQG----CVSGFQGMNLPTASGELWILGDVFIRQYFAVFDRANNQVGLAPVA 386          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 3
Query:   24 IIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 275
            ++ C   PT+P++SF +G K + L+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD G  RIGFA A
Sbjct:  316 VVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRGNNRIGFALA 399          
The following BLAST results are available for this feature:
BLAST of CK934655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CARDH_CYNCA1.775e-1466.15Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CATE_RABIT2.319e-1443.48Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
PEPA_PIG3.028e-1442.86Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
RENI_RAT3.955e-1438.10Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
CARDG_CYNCA3.955e-1467.19Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDF_CYNCA3.955e-1467.19Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA3.955e-1467.19Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEPA_SUNMU1.503e-1340.66Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA_CANFA1.503e-1340.66Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
RENI_CALJA3.348e-1338.10Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934655 ID=CK934655; Name=CK934655; organism=Citrus sinensis; type=EST; length=558bp
GGGCAAATCCGATGGGAGAATCAATTATTGACTGTGGTCGCATTCCAACC
ATGCCAAATGTTTCATTCACCATCGGAGACAAAATTTTCAACCTCTCTCC
AGAGCAGTATATTCTGAAAACCGGAGAAGGGATTGCAGAAGTCTGCATCA
GTGGCTTCATGGCTTTCGACCTGCCTCCTCCAAGGGGTCCTCTGTGGATT
CTGGGAGATGTATTCATGGGGGTTTATCACACTGTTTTCGACTCTGGTAA
GCTCCGGATCGGCTTTGCTGAGGCTGCGTAATGATCTACTTACTGTCAAG
TTTTTATGTAGTAGCAGCGATCATCACCTGCTCATATGAGGAGGAGGGTT
GTAGAATGTAGATTATGGTTTTCATGTACTGTAAAACGATCAGTATGCTT
TTATGCATAACTATCATCATCATCACCACAGATGATATGCTGATATATAC
TTATGTAAAATCCTATCATCCTATGTTTAAAGTACTTCAATTTTATGATA
TTCTGACGTGATAGCTTTACTTATTTGGACAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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