CK934655

Overview
NameCK934655
Unique NameCK934655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934655_ssr413 microsatellite CK934655_ssr413:413..424. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6287 contig Csv1_Contig6287:1363..1918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.373e-13
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  GE ++ C  I ++P++ FTI    + + P  YIL++       CISGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N +GE+II C  I ++P++ FTI +  + L    YILK  +     C+SGF   +L    G LWILGDVF+  Y TVFD    ++G A AA
Sbjct:  301 NLLGENIISCSAIDSLPDIVFTINNVQYPLPASAYILKEDDD----CLSGFDGMNLDTSYGELWILGDVFIRQYFTVFDRANNQVGLAAAA 387          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 3
Query:   15 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 275
            G+  IDCG+  ++ +V+FT+    F L PE YIL+        C+S FM  D+P P GPL ILGD F+  Y++++D G   +G A A
Sbjct:  312 GQFTIDCGKKSSLEDVTFTLAGYNFTLGPEDYILEASGS----CLSTFMGMDMPAPVGPLAILGDAFLRKYYSIYDLGADTVGIATA 394          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  G+  + C  I  +P++ FTI    + L    YIL++ EG    C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  301 NSQGQMAVSCSSIKNLPDIVFTINGIQYPLPASAYILQSQEG----CSSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRANNQVGLAPVA 387          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  G+ ++ C  I ++P++ FTI    + + P  YIL++ EG    CISGF   +LP   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQS-EGS---CISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.272e-12
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 3
Query:   15 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            GE +I C  I ++P++ FTI    + + P  YIL++      +C SGF   D+    G LWILGDVF+  Y TVFD G  +IG A  A
Sbjct:  289 GEVVISCSSIDSLPDIVFTINGVQYPVPPSAYILQSNG----ICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQIGLAPVA 372          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 3
Query:   18 ESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 275
            E +++C ++PT+P++SF +G K + L+   Y+L+        C       D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  315 EYVVNCNQMPTLPDISFHLGGKAYTLTSADYVLQDPYNNIS-CTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDRRNNRIGFALA 399          
BLAST of CK934655 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 3
Query:    6 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 278
            N  GE ++ C  I ++P++ FTI    + + P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
The following BLAST results are available for this feature:
BLAST of CK934655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PEPA2_MACFU4.373e-1340.66Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA_MACMU5.711e-1340.66Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA4_MACFU5.711e-1340.66Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPA1_RABIT5.711e-1342.86Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CARP_NEUCR5.711e-1341.38Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
PEPA_SORUN7.459e-1340.66Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEPA_HUMAN7.459e-1341.76Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA_BOVIN1.272e-1242.05Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
RENI_SHEEP1.662e-1237.21Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPA1_MACFU1.662e-1239.56Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934655 ID=CK934655; Name=CK934655; organism=Citrus sinensis; type=EST; length=558bp
GGGCAAATCCGATGGGAGAATCAATTATTGACTGTGGTCGCATTCCAACC
ATGCCAAATGTTTCATTCACCATCGGAGACAAAATTTTCAACCTCTCTCC
AGAGCAGTATATTCTGAAAACCGGAGAAGGGATTGCAGAAGTCTGCATCA
GTGGCTTCATGGCTTTCGACCTGCCTCCTCCAAGGGGTCCTCTGTGGATT
CTGGGAGATGTATTCATGGGGGTTTATCACACTGTTTTCGACTCTGGTAA
GCTCCGGATCGGCTTTGCTGAGGCTGCGTAATGATCTACTTACTGTCAAG
TTTTTATGTAGTAGCAGCGATCATCACCTGCTCATATGAGGAGGAGGGTT
GTAGAATGTAGATTATGGTTTTCATGTACTGTAAAACGATCAGTATGCTT
TTATGCATAACTATCATCATCATCACCACAGATGATATGCTGATATATAC
TTATGTAAAATCCTATCATCCTATGTTTAAAGTACTTCAATTTTATGATA
TTCTGACGTGATAGCTTTACTTATTTGGACAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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