CK935606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.267e-50 Identity = 73/107 (68.22%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 226 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 GTTTLAF F GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC FW R L +CR++EL NK ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 161 HSP 2 Score: 68.1662 bits (165), Expect = 1.267e-50 Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVDSEG R+ G F+VGSGS YAYGVLD G + DM+ I+ A RDA Sbjct: 162 RGPGLYYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDA 223
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_YEAST (Proteasome component PRE2 OS=Saccharomyces cerevisiae GN=PRE2 PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.802e-50 Identity = 71/110 (64.55%), Postives = 91/110 (82.73%), Query Frame = 1 Query: 211 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 540 +K A GTTTLAF F+ G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ Sbjct: 70 IKIAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGY 179 HSP 2 Score: 67.781 bits (164), Expect = 2.802e-50 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GP +YYVDS+G RLKG F VGSG +AYGVLDS YK+D+S+ I A RDA Sbjct: 183 EGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDA 244
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB8_BOVIN (Proteasome subunit beta type-8 OS=Bos taurus GN=PSMB8 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.375e-49 Identity = 70/117 (59.83%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 196 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 ++K ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADC +W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ Sbjct: 62 ESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK 178 HSP 2 Score: 72.0182 bits (175), Expect = 1.375e-49 Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVD G RL G FS GSG+ +AYGV+DSGY+ D+SI I HAT RD+ Sbjct: 179 KGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDS 240
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.045e-49 Identity = 71/118 (60.17%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 193 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 ++ K ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ Sbjct: 61 QERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDK 178 HSP 2 Score: 68.9366 bits (167), Expect = 3.045e-49 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S I +AT RD+ Sbjct: 179 KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDS 240
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.493e-48 Identity = 70/118 (59.32%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 193 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 ++ ++ A GTTTLAF F+ GV+VA DSRA+ G YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ Sbjct: 61 QERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDK 178 HSP 2 Score: 68.1662 bits (165), Expect = 1.493e-48 Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRD 815 +GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S I +AT RD Sbjct: 179 KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRD 239
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB8_HUMAN (Proteasome subunit beta type-8 OS=Homo sapiens GN=PSMB8 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 9.538e-48 Identity = 70/112 (62.50%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 211 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ Sbjct: 67 IEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK 178 HSP 2 Score: 66.6254 bits (161), Expect = 9.538e-48 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S I +AT RD+ Sbjct: 179 KGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDS 240
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.112e-47 Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 190 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 +K+ + + H GTTTLAF F+ GV+VA DSRA+ G YISS V K+IEINP +LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+N++Y YRGM LS+G+MI GWD+ Sbjct: 62 EKNIRKEMVH--GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDK 178 HSP 2 Score: 67.0106 bits (162), Expect = 2.112e-47 Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVD G RL G FS GSGS YAYGV+DSGY+ +S I +AT RD+ Sbjct: 179 KGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDS 240
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB8_PIG (Proteasome subunit beta type-8 (Fragment) OS=Sus scrofa GN=PSMB8 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.552e-24 Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRD 815 +GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D+SI I HAT RD Sbjct: 44 KGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104 HSP 2 Score: 60.077 bits (144), Expect = 1.552e-24 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 418 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 RL+ L N RISV+ ASKL +N++Y YRGMGLS+G+MI GWD+ Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDK 43
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.364e-21 Identity = 33/111 (29.73%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 214 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q R + ++ +L+++ +++ G + L++N L R + V +I G D+ Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDK 115 HSP 2 Score: 55.8398 bits (133), Expect = 2.364e-21 Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 3 Query: 612 ELFVRGLQ--GPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAA 821 +L + G+ GPG+Y +D+ GG ++ TR S GSGSP AYGVL+ Y+ +M++ I++AT RD+A Sbjct: 107 QLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSA 179
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB11_MOUSE (Proteasome subunit beta type-11 OS=Mus musculus GN=Psmb11 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.809e-21 Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 220 AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 549 A GTTTLAF F+ GV+ AAD+R+S G Y++ + +K+I ++ +LGT +G +ADC W+R L + RL EL + SV G +KLLA ++ YRG+ L V T + GWD + Sbjct: 47 AHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHS 156 HSP 2 Score: 72.4034 bits (176), Expect = 4.083e-12 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 3 Query: 600 CVSFELFVRGLQGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 CV+ L GP L+YV S+G L+G FSVGSGSPYAYGVLD GY +DM+I + HAT RDA Sbjct: 145 CVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDA 217 The following BLAST results are available for this feature:
BLAST of CK935606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935606 ID=CK935606; Name=CK935606; organism=Citrus sinensis; type=EST; length=919bpback to top |