CK935606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 3.354e-97 Identity = 131/164 (79.88%), Postives = 136/164 (82.93%), Query Frame = 1 Query: 64 MKLDTSGLESTSPF--FGSGDELCPEXXXXXXXXXXXXTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 549 MKLDTSGLE+T P FGS E+ TDFD FQK +K AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDET Sbjct: 1 MKLDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDET 164 HSP 2 Score: 102.064 bits (253), Expect = 3.354e-97 Identity = 48/62 (77.42%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 636 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAA 821 GPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYKFDMS+ IYHATFRD A Sbjct: 165 GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGA 226 HSP 3 Score: 44.669 bits (104), Expect = 3.354e-97 Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 1 Query: 865 WKKLSGDDVGELHYHYYP 918 W KLSGDDVGELHYHYYP Sbjct: 241 WTKLSGDDVGELHYHYYP 258
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 9.676e-97 Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 1 Query: 64 MKLDTSGLESTSPF--FGSGDELCPEXXXXXXXXXXXXTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 549 MKLDTSG E++ P FGS ++ E +FD FQK K LKHAKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDET Sbjct: 1 MKLDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDET 164 HSP 2 Score: 100.908 bits (250), Expect = 9.676e-97 Identity = 47/62 (75.81%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 636 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAA 821 GPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYK+DMS+ IYHATFRD A Sbjct: 165 GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGA 226 HSP 3 Score: 44.669 bits (104), Expect = 9.676e-97 Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 1 Query: 865 WKKLSGDDVGELHYHYYP 918 W KLSGDDVGELHYHYYP Sbjct: 241 WTKLSGDDVGELHYHYYP 258
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.698e-95 Identity = 130/162 (80.25%), Postives = 135/162 (83.33%), Query Frame = 1 Query: 64 MKLDTSGLESTSPFFGSGDELCPEXXXXXXXXXXXXTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 549 MKLDTSGLEST+P F D + TDFD FQK+ +K AKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY+YRGMGLSVGTMIAGWDET Sbjct: 1 MKLDTSGLESTAPIFRRSDFVFDGLQMTPSFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDET 162 HSP 2 Score: 98.5969 bits (244), Expect = 6.698e-95 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 636 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAA 821 GPGLYYVDSEGGRLKG RFSVGSGSPYAYGVLD+GYK+DM++ IYHAT+RD A Sbjct: 163 GPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGA 224 HSP 3 Score: 38.891 bits (89), Expect = 6.698e-95 Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 1 Query: 865 WKKLSGDDVGELHYHYYP 918 WKK++GDDVG+LH+ YYP Sbjct: 239 WKKVTGDDVGDLHFQYYP 256
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 1.198e-57 Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 226 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 GTTTLAF F GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ Sbjct: 59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 165 HSP 2 Score: 82.4185 bits (202), Expect = 1.198e-57 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ + IY AT+RDA Sbjct: 166 RGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDA 227
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.561e-57 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 226 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 165 HSP 2 Score: 80.4925 bits (197), Expect = 1.561e-57 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ + IY AT+RDA Sbjct: 166 RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDA 227
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.561e-57 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 226 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 165 HSP 2 Score: 80.4925 bits (197), Expect = 1.561e-57 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ + IY AT+RDA Sbjct: 166 RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDA 227
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.561e-57 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 226 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 165 HSP 2 Score: 80.4925 bits (197), Expect = 1.561e-57 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ + IY AT+RDA Sbjct: 166 RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDA 227
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_RAT (Proteasome subunit beta type-5 OS=Rattus norvegicus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 2.654e-57 Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 226 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDE 546 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ Sbjct: 59 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDK 165 HSP 2 Score: 80.8777 bits (198), Expect = 2.654e-57 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 633 QGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 +GPGLYYVDSEG R+ GT FSVGSGS YA+GV+D GY +D+ + IY AT+RDA Sbjct: 166 RGPGLYYVDSEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDA 227
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.025e-55 Identity = 72/113 (63.72%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 211 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDET 549 L+ A GTTTLAF++ G++V+ DS+++ G Y++S+SVKK+IEI P +LGTMAGGAADC FW R LG +CRL+EL NK ISV ASK+LANI+YSY+G GLS+GTMI GWD+T Sbjct: 57 LEFAHGTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKT 169 HSP 2 Score: 76.2554 bits (186), Expect = 2.025e-55 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 636 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 GP LYYVD++G RL G RFS GSGS YAYGVLD+G+K+DM+ +YHAT RDA Sbjct: 170 GPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDA 230 HSP 3 Score: 25.409 bits (54), Expect = 2.025e-55 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 865 WKKLSGDDVGELHYHYY 915 WKK+S DD +L+ YY Sbjct: 246 WKKISSDDCFKLYQKYY 262
BLAST of CK935606 vs. ExPASy Swiss-Prot
Match: PSB5_SCHPO (Proteasome subunit beta type-5 OS=Schizosaccharomyces pombe GN=pts1 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 7.451e-51 Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 1 Query: 193 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG 537 K+ +K GTTTLAF ++ G++V DSRAS G I+SQ+VKK+IEINPY+LGT+AGGAADCQFW LG++CRLH+L NK ISV+ ASK+L+NI YSY+G GLS+GTM+AG Sbjct: 50 KNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAG 164 HSP 2 Score: 70.4774 bits (171), Expect = 7.451e-51 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 627 GLQGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDA 818 G G LYY+DS+G RLKG FSVGSGS +AYGVLDSGY++D+S I AT RDA Sbjct: 166 GKGGTALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDA 229 The following BLAST results are available for this feature:
BLAST of CK935606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935606 ID=CK935606; Name=CK935606; organism=Citrus sinensis; type=EST; length=919bpback to top |