CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_BOTFU (Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckeliana GN=sod1 PE=3 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 7.479e-37 Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 ++G S + G VT Q E+ PTT+ +TG G+H+H++GD TNGC S G HFNP+ THGAP DEVRH GDLGN +A G A ++ D+ I L GP +V+GR VVH DDLGKG +E S TGNAG R ACGV+G+ Sbjct: 8 VRGDSKISGTVTFEQSEENSPTTITWNITGNDANAERGMHVHQFGDNTNGCTSAGPHFNPHGQTHGAPTDEVRHVGDLGNFKTDAQGNATGSVQDSHIKLIGPLSVIGRTVVVHSGTDDLGKGENEESKKTGNAGTRPACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36 Identity = 73/146 (50.00%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 ++G S V G + QE + PT + ++G G+H+H +GD TNGC S G HFNP+N THGAP+D RH GDLGNI +ANG ++ T+ D+ + L GP +V+GR VVH DDLGKG +E SL TGNAG R ACGV+G++ Sbjct: 8 VRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACGVIGIS 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.176e-36 Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 LKG S+V G+V QE + T ++ +TG G H+H +GD TNGC S G HFNP N HGAP+DE RH GDLGNI +A G+++ ++ D I L GP ++VGR VVH +DDLGKGG SL TGNAG R ACGV+G++ Sbjct: 8 LKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACGVIGIS 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_PODAN (Superoxide dismutase [Cu-Zn] OS=Podospora anserina GN=SOD1 PE=3 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.712e-36 Identity = 76/146 (52.05%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 ++G S V G V QE + GPTT+ +TG G+H+H +GD TNGC S G HFNP+ THG DE RH GDLGNI +A G ++ T+ DN I L GP +V+GR VVH DDLGKG E SL TGNAG R ACGV+G++ Sbjct: 8 VRGDSKVSGSVVFEQETENGPTTITWDITGHDANAKRGMHIHTFGDNTNGCTSAGPHFNPHGKTHGNRTDENRHVGDLGNIETDAQGNSKGTVTDNLIKLIGPESVIGRTVVVHAGTDDLGKGDTEESLKTGNAGARPACGVIGIS 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_HUMLT (Superoxide dismutase [Cu-Zn] OS=Humicola lutea PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.712e-36 Identity = 74/145 (51.03%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L+G S + G VT Q + PTTV+ +TG P G+H+H++GD TNGC S G H+NP THGAP DEVRH GDLGNI +A G A ++ D I + G +++GR VVH DDLG+GG+E S TGNAG R ACGV+G+ Sbjct: 8 LRGDSKITGTVTFEQANESAPTTVSWNITGHDPNAERGMHIHQFGDNTNGCTSAGPHYNPFKKTHGAPTDEVRHVGDLGNIKTDAEGNAVGSVQDKLIKVIGAESILGRTIVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 8.269e-36 Identity = 72/146 (49.32%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 L+G + V G V QE + PTT+ +TG G H+H +GD TNGC S G HFNP+ THGAP DE RH GDLGN+ + G A+ ++ D + L GP++V+GR V+H DDLGKG +E SL TGNAG R ACGV+G++ Sbjct: 8 LRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIGIS 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CANAL (Superoxide dismutase [Cu-Zn] OS=Candida albicans GN=SOD1 PE=3 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.080e-35 Identity = 75/146 (51.37%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 ++G S V+G V QE + PTT++ + G P G H+H++GD TNGC S G HFNP HGAP+D+ RH GDLGNI + NGVA+ T D I L G ++++GR VVH DD GKGG E S TTG+AG R ACGV+GLT Sbjct: 8 VRGDSKVQGTVHFEQESESAPTTISWEIEGNDPNALRGFHIHQFGDNTNGCTSAGPHFNPFGKQHGAPEDDERHVGDLGNISTDGNGVAKGTKQDLLIKLIGKDSILGRTIVVHAGTDDYGKGGFEDSKTTGHAGARPACGVIGLT 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODE_HAECO (Extracellular superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.842e-35 Identity = 73/135 (54.07%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 382 GVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 G++ L Q G +N V+GL PG HG H+HE GD NGC++ GAHFNP+ M HGAP+D RH GDLGNI G I D+ ISL G + V+GRA V+H DDLG+G ELS TTGNAG R+ACGV+G+ Sbjct: 49 GIIDLVQT-GTLVKMNGSVSGLQPGLHGFHIHEKGDLGNGCLAAGAHFNPHKMMHGAPEDSNRHVGDLGNIETPKTGDTPILISDSVISLTGQHNVIGRAIVIHADMDDLGRGTSELSKTTGNAGARVACGVIGI 182
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.842e-35 Identity = 73/137 (53.28%), Postives = 97/137 (70.80%), Query Frame = 1 Query: 376 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVA-NANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVV 780 V G + +QE +G P VN ++GL+ G HG H+HE+GDT+NGC+S GAHFNP ++ HG P +RH GDLGNI + ++ VA I DN ISL G +++GR VVHE +DDLG GG+ LS TTGNAG R+ACG++ Sbjct: 13 VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHENQDDLGLGGN-LSKTTGNAGARVACGIL 148
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.360e-35 Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 376 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVV 780 VEG VTL+QE +G P +N V+GLTPG HG+H+HE+GDT+NGC+S G H+NP + HG+P D RH GDLGNI A +NGVA +I D +SL G +V+GR V+H DD G+G S T G++G R+ CG++ Sbjct: 13 VEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHSDRDDYGRGNFPDSKTAGHSGKRVGCGII 148 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |