CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.319e-77 Identity = 150/229 (65.50%), Postives = 171/229 (74.67%), Query Frame = 1 Query: 118 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXXAFHGVSLKFP---SRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 AH +L ++P +++ +L+ + NP +FHGVSLK L LS AA A+ KPLT LKGTS+VEGVVTLTQE+ GPTTVNV++TGLTPGPHG HLHE+GDTTNGC+STG HFNPN THGAP+DE RHAGDLGNI+ANA+GVAEATIVDNQI L GPN VVGRAFVVHEL DDLGKGGHELSL+TGNAGGRLACGVVGLTPV Sbjct: 3 AHCILFSSPAATT-SLIFPISNPNTAVSLPSS----------SFHGVSLKSTINRQSLTLSAAASAAPKPLTVFAATKKAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 220
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.809e-76 Identity = 146/227 (64.32%), Postives = 168/227 (74.01%), Query Frame = 1 Query: 118 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXXAFHGVSLKF-PSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 AH +L +AP ++ +L++ + +F+G+S K P+ +LSL+ A+ KPLT LKGTSNVEGVVTLTQED GPTTVNVR++GL PG HG HLHE+GDTTNGCMSTG HFNP+ THGAP+DEVRHAGDLGNIVAN +GVAEATIVDNQI L GPN+VVGRA VVHELEDDLGKGGHELS TTGNAGGRLACGVVGLTPV Sbjct: 3 AHTILASAPSHTTFSLISPFSSTPTNALSSSLQSS-------SFNGLSFKLSPTTQSLSLSTSAASKPLTIVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGLTPV 222
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.669e-76 Identity = 140/186 (75.27%), Postives = 154/186 (82.80%), Query Frame = 1 Query: 244 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 +FHGVSLK S+ +L+L++V S KP LKGTSNVEGVVTLTQ+D GPTTV VR+TGL PG HG HLHE+GDTTNGCMSTG HFNPN +THGAP DEVRHAGDLGNI ANA+GVAEAT+VDNQI L GPN+VVGRA VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+ Sbjct: 34 SFHGVSLKVKSKTPQSLTLSSVTSPKPFIVFAATKKAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 219
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.068e-75 Identity = 149/227 (65.64%), Postives = 165/227 (72.69%), Query Frame = 1 Query: 115 MAHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 MA LV+ P SSH+LL T +F GVS+K + S A ++ KPLT LKGTS VEGVVTLTQ+D GPTTVNVR+TGLTPG HG HLHEYGDTTNGC+STG HFNPN +THGAP+DE+RHAGDLGNIVANA GVAEATIVDNQI L GPN+VVGRA VVHEL+DDLGKGGHELSL+TGNAGGRLACGVVGLTPV Sbjct: 1 MASQTLVSPSPLSSHSLLRT-----------------------SFSGVSVKLAPQF--STLATSNFKPLTVVAAAKKAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 202
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.821e-75 Identity = 139/186 (74.73%), Postives = 154/186 (82.80%), Query Frame = 1 Query: 244 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 +F GVSL ++ +L+L AV + KPLT LKG SNVEGVVTL+Q+D GPTTVNVR+TGL PG HG HLHEYGDTTNGCMSTGAHFNPN +THGAP DE+RHAGDLGNIVANA+GVAE T+VDNQI L GPN+VVGRA VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+ Sbjct: 32 SFLGVSLNVNAKFGQSLTLYAVTTPKPLTVFAATKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 217
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 6.920e-75 Identity = 136/183 (74.32%), Postives = 151/183 (82.51%), Query Frame = 1 Query: 247 FHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 FHG+SLK + S+ + KPL+ LKGTS+VEGVVTL+QED GPTTV+VR+TGLTPG HG HLHE+GDTTNGCMSTGAHFNPN MTHGAP+D+VRHAGDLGNI+ANA GVAEATIVD QI L GPN V+GRA VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+ Sbjct: 33 FHGLSLKLTRQ---SIPLATAPKPLSVVAVTKKAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 212
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 279.641 bits (714), Expect = 1.542e-74 Identity = 140/187 (74.87%), Postives = 155/187 (82.89%), Query Frame = 1 Query: 244 AFHGVSLKFPS--RL-NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 +F GVSL + RL ++S A A K LT LKGTS+VEGVVTLTQ+D GPTTVNVR+TGLTPGPHG HLHE+GDTTNGC+STG HFNPNNMTHGAP+DE RHAGDLGNI ANA+GVAE TIVDNQI L GPN+VVGRAFVVHEL+DDLGKGGHELSLTTGNAGGRLACGV+GLTP+ Sbjct: 30 SFRGVSLNNNNLHRLQSVSFAVKAPSKALTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLTPL 216
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.443e-72 Identity = 134/173 (77.46%), Postives = 144/173 (83.24%), Query Frame = 1 Query: 277 RLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 RL A A+ + L LKGTS VEGVVTLTQ+D GPTTVNVRVTGLTPG HG HLHE+GDTTNGC+STG HFNPNN+THGAP+DEVRHAGDLGNIVANA GVAEATIVD QI L GPN+VVGRAFVVHELEDDLGKGGHELSL+TGNAGGRLACGVVGLTP+ Sbjct: 39 RLAAGPAGAAAARALVVADATKKAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPL 211
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.595e-71 Identity = 132/184 (71.74%), Postives = 150/184 (81.52%), Query Frame = 1 Query: 244 AFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 +F GVS+K + S + + +PL+ LKG S VEGVVTLTQE+ PTTVNVR+TGLTPG HG HLHEYGDTTNGC+STG HFNPN +THGAP+DE+RHAGDLGNI+A+ANGVAEATIVDNQI L GPN+V+GRA VVHELEDDLGKGGHELSL+TGNAGGRLACGVVGLTPV Sbjct: 21 SFSGVSVKLSPQF--STLSRSKFQPLSVVAAAKKAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 202
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.554e-71 Identity = 130/169 (76.92%), Postives = 142/169 (84.02%), Query Frame = 1 Query: 289 SLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 S+AA AS + + LKGTS V+GVVTL QED GPTTVNVR+TGLTPG HG HLHEYGDTTNGC+STG+HFNPN +THGAP D VRHAGDLGNIVAN +G+AEATIVD+QI L G N+VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV Sbjct: 48 SIAAAASPRSMVVVAATKKAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 216 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |