CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODE_HUMAN (Extracellular superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD3 PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.033e-19 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 466 LHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 +H+H++GD + GC STG H+NP + H +H GD GN +G SL GP+++VGRA VVH EDDLG+GG++ S+ GNAG RLAC VVG+ Sbjct: 113 IHVHQFGDLSQGCESTGPHYNPLAVPHP------QHPGDFGNFAVR-DGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODE_RABIT (Extracellular superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD3 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.567e-18 Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 466 LHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 783 +H+H++GD + GC STGAH+NP + H +H GD GN +G SL GP+++VGRA VVH EDDLG+GG+ S+ GNAG RLAC VVG Sbjct: 117 IHVHQFGDLSQGCDSTGAHYNPLAVQHP------QHPGDFGNFAVR-DGRLWKYRSGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNAASVENGNAGPRLACCVVG 215
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_DEIRA (Superoxide dismutase [Cu-Zn] OS=Deinococcus radiodurans GN=sodC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 50/152 (32.89%), Postives = 70/152 (46.05%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNG---------CMSTGAHFNPN-NMTHGAP--KDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGV 777 L T V G T + G T V++ V+GL GPHGLH+HE + G + G HF+P + H P +++ H GDL I +G N++ + GP V+GR+ V+H DD GN+GGR CGV Sbjct: 33 LDQTGKVTGTATFSPSPIG-TRVSIEVSGLKAGPHGLHIHENPNCNPGPDAQGQTIPFGAAGGHFDPGASHNHDGPHARNDQGHGGDLPMITVGEDGKGRLNFDTNRLKMTGPTGVLGRSIVIHADADDYQTN------PAGNSGGRERCGV 177
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CAUCR (Superoxide dismutase [Cu-Zn] OS=Caulobacter crescentus GN=sodC PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 53/147 (36.05%), Postives = 67/147 (45.58%), Query Frame = 1 Query: 364 GTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDT-TNGCMSTGAHFNPNNMT-HGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPN------TVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVV 780 G G VT+T+ G + + + GLTPG H H HE GD T S GAH + T HG + +GDL NI A A+G A A I +SL G G + VVH DD + G AG R+ACGV+ Sbjct: 34 GDGKDAGAVTVTEAPHG-VLLKLELKGLTPGWHAAHFHEKGDCGTPDFKSAGAHVHTAATTVHGLLNPDANDSGDLPNIFAAADGAATAEIYSPLVSLKGAGGRPALLDADGSSIVVHANPDD------HKTQPIGGAGARVACGVI 173 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |