CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.112e-48 Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = 1 Query: 376 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 V+G + QE GPTTV V+GL PG HG H+H GDTTNGCMSTG H+NP HGAP+DE RHAGDLGN+ A +GVA +VD+QI L GPN+++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 14 VKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.453e-48 Identity = 88/143 (61.54%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V+G + TQE GPT V V+GL PG HG H+H GDTTNGCMSTG H+NP + HGAP+DE RHAGDLGN+ A A+GVA + D+QI L GPN+++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 8 LGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.478e-48 Identity = 89/143 (62.24%), Postives = 105/143 (73.43%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V+G + T E G TTV V+GL PG HG H+H GD TNGCMSTG HFNP+ THGAP+D RHAGDLGNI+ +G A TI D+QI L GPN++VGRA VVH DDLGKGGHELSL+TGNAGGR+ACG++GL Sbjct: 8 LNSSEGVKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 2.478e-48 Identity = 87/143 (60.84%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + TQ+ PTTVN ++GL PG HG H+H GDTTNGCMSTG H+NP HGAP+DEVRHAGDLGNI +G A TI D QI L GP +++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 8 LNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 5.521e-48 Identity = 91/143 (63.64%), Postives = 104/143 (72.73%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + TQE G TTV+ V+GL PG HG H+H GDTTNGCMSTG HFNP+ THGAP+D RHAGDLGNI +G A TI D QI L GPN++VGRA VVH DDLGKGGHELSL TGNAGGR+ACG++GL Sbjct: 8 LNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.211e-48 Identity = 87/143 (60.84%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V+G + TQE GPTTV ++GL PG HG H+H GDTTNGCMSTG HFNP HGAP+DE RHAGDLGN+ +G IVD+QI L G N+++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 8 LGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 9.417e-48 Identity = 87/143 (60.84%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L ++ V G + +QE GPTTV + GL PG HG H+H GDTTNGC+STG HFNPN HGAP+DE RHAGDLGNI +G TI DN I L G N+++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 8 LSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 9.417e-48 Identity = 88/143 (61.54%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V+G + +QE GPT+V V+GL PG HG H+H GDTTNGCMSTG HFNP HGAP+DE RHAGDLGNI A A+GVA + D+QI L G ++++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 8 LASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.230e-47 Identity = 87/143 (60.84%), Postives = 104/143 (72.73%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + TQ GPTTV ++GL PG HG H+H GDTTNGCMSTG HFNP HGAP+D++RHAGDLGN+ +G +I+D+QI L GPN++VGRA VVH DDLGKGGHELS TTGNAGGR+ACGV+GL Sbjct: 8 LSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.606e-47 Identity = 87/143 (60.84%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + TQ+ PTTV V+GL PG HG H+H GDTTNGCMSTG H+NP HGAP+DEVRHAGDLGNI +G A T+ D QI L GP +++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 8 LSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |