CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.098e-47 Identity = 87/144 (60.42%), Postives = 106/144 (73.61%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 + GT+ V+GVV TQE D GP V+ +GL G HG H+HE+GDTTNGC S GAHFNP HGAP+D +RH GDLGN+VA A+G A D ISL+G ++++GR V+HE EDDLG+GGHELS TGNAGGRLACGV+GL Sbjct: 7 MTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 3.579e-47 Identity = 88/143 (61.54%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L GT +V+G + +QE GPTTV ++GL PG HG H+H GDTTNGCMSTG HFNP HGAP+DE RHAGDLGN+ A +GV I D+QI L GP++++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 8 LAGT-DVKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 149
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.674e-47 Identity = 89/143 (62.24%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L G+ V+G V QE GPTT+ ++GL PG HG H+H GDTTNGCMSTG HFNP HGAP+D RHAGDLGN+ +G T+ D+QI L G N+VVGRA VVH DDLGKGGHELS TTGNAGGRLACGV+GL Sbjct: 8 LTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHADSDDLGKGGHELSKTTGNAGGRLACGVIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 4.674e-47 Identity = 87/143 (60.84%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G TQ PTTVN ++GL PG HG H+H GDTTNGCMSTG H+NP HGAP+DEVRHAGDLGNI +G A TI D QI L GP +++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 8 LNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 187.193 bits (474), Expect = 1.041e-46 Identity = 87/144 (60.42%), Postives = 105/144 (72.92%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + +QE +G PTTV ++GL PGPHG H+H GDTTNGCMSTG H+NP+ HGAP DE RHAGDLGN+ +G A+ TIVD QI L G +++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 8 LSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 151
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.360e-46 Identity = 88/143 (61.54%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + +QE GPTTV V+GL PG HG H+H GDTTNGCMSTG HFNP HGAP D+ RHAGDLGNI +G A TI D QI L G N+V+GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 8 LSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.029e-46 Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 LKGT V G V QE + P V +TGLTPG HG H+H +GD TNGC+S G HFNP++ THG P D VRH GDLGN+ A+A+GVA+ I D ++L G ++++GR V+HE EDDLGKGG+E SL TGNAGGRLACGV+G+T Sbjct: 9 LKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGGNEESLKTGNAGGRLACGVIGIT 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.957e-46 Identity = 85/143 (59.44%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKGT V G V Q GP T+ +TGLTPG HG H+H +GD TNGC+S G H+NP + HG P DE RH GDLGN+ AN NGVAE I D Q+ L G +++GR VVHE EDDLGKGG E SL TGNAG RLACGV+G+ Sbjct: 7 LKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIGI 149
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45 Identity = 88/143 (61.54%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V+G + QE G TTV V+GL PG HG H+H GDTTNG MSTG HFNP+ HGAP+D RHAGDLGNI+ +G A TI D QI L GPN++VGRA VVH D LGKGGHELSLTTGNAGGR+ACG++GL Sbjct: 8 LNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGL 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.504e-45 Identity = 84/143 (58.74%), Postives = 100/143 (69.93%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 L + V G + +Q+ PTTV V+GL PG HG H+H GDTTNGCMSTG H+NP HGAP+DE RHAGDLGNI +G A TI D QI L GP +++GR VVH DDLGKGGHEL+ TTGNAGGR+ACG++GL Sbjct: 8 LSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGL 150 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |