CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42 Identity = 79/144 (54.86%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGG-PTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+GV+ Q+ G P V+ ++TGLT G HG H+H+YGD T GC + G HFNP++ HG P DE RH GDLGN+ A +GVA +I D ISL G ++++GR VVHE +DDLGKGG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 3.466e-42 Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG S V+G + Q E GP V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE DDLGKGG+E S TGNAGGRLACGV+G+ Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 3.466e-42 Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG S V+G + Q E GP V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE DDLGKGG+E S TGNAGGRLACGV+G+ Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 3.466e-42 Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG S V+G + Q E GP V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE DDLGKGG+E S TGNAGGRLACGV+G+ Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 4.527e-42 Identity = 83/143 (58.04%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 373 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVA-NANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 +V G V Q+D P V+ V GLT G HG H+HE+GD TNGC S GAHFNP HG P VRH GDLGNI A +GV + +I D+QISL GPN+++GR VVH DDLG GGHELS TTGNAGGR+ACGV+GL + Sbjct: 12 DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGLAKI 154
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 171.4 bits (433), Expect = 5.912e-42 Identity = 80/143 (55.94%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 +KG + VEGV+ Q+ GP V ++TGL+ G HG H+HE+GD TNGC S GAHFNP HG PKD RH GDLGN+ A GVAE I D+ ISL GP+ ++GR VVH DDLG+GG S TGNAG RLACGV+G+ Sbjct: 10 MKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNVTAK-GGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIGI 151
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 7.722e-42 Identity = 78/144 (54.17%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGG-PTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G + Q+ G P ++ ++TGLT G HG H+H+YGD T GC S G HFNP++ HG P DE RH GDLGN+ A +GVA +I D ISL G ++++GR VVHE +DDLGKGG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 1.008e-41 Identity = 80/142 (56.34%), Postives = 99/142 (69.72%), Query Frame = 1 Query: 373 NVEGVVTLTQEDGG-PTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 + +G V QED G P V VTGL G HG H+HE+GD TNGCMS+G HFNP++ HGAP DE RH GDLGNI A+ +G I D++I+L G N+++GR VVH DDLGKGGHELS TTGNAG R+ CGV+G+ + Sbjct: 12 DAKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGIAKI 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.720e-41 Identity = 80/142 (56.34%), Postives = 97/142 (68.31%), Query Frame = 1 Query: 373 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 + +G V QE +G P V VTGL G HG H+HE+GD TNGCMS+G HFNP HGAP DE RH GDLGNI+AN +G I D +I+L G N+++GR VVH DDLGKGGHELS TTGNAG R+ CGV+G+ + Sbjct: 12 DAKGTVFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGIAKI 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.247e-41 Identity = 79/142 (55.63%), Postives = 101/142 (71.13%), Query Frame = 1 Query: 373 NVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKG---GHELSLTTGNAGGRLACGVVGLT 789 N+ G + Q+D TT++ + GLTPG HG H+H+YGDTTNGC+S G HFNP N THG P DE+RH GDLGNIVA A+G A I D + L GPN+++GR+ VVH +DDLGKG + SL TGNAGGR+ACG+V ++ Sbjct: 58 NINGTIHF-QQDKNSTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGIVAIS 198 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |