CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.247e-41 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G++ Q E GP V + GLT G HG H+HE+GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA+ +I D+ ISL G + ++GR VVHE DDLGKGG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.247e-41 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G++ Q E GP V + GLT G HG H+HE+GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA+ +I D+ ISL G + ++GR VVHE DDLGKGG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 2.247e-41 Identity = 84/146 (57.53%), Postives = 102/146 (69.86%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 L+G++ V GVVTL Q + PTT+ + G P G H+HE+GD TNGC+S G HFNP THGAP+DE RH GDLGNI +A GVA+ I D+ + L GP +VVGR+ VVH DDLGKGG+E SL TGNAG R ACGV+GLT Sbjct: 8 LRGSAGVSGVVTLEQASEQDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGLT 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41 Identity = 80/145 (55.17%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP 792 LKG V+G + + G V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD ISL G +++GR VVHE DDLG+GG+E S TGNAGGRLACGV+G+ P Sbjct: 9 LKGDGPVQGTIRF-EAKGDKVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGGRLACGVIGIAP 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41 Identity = 79/144 (54.86%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G + Q E GP V +TGL G HG H+H++GD T GC S G HFNP + HG P+DE RH GDLGN+ A +GVA+ +I D+ ISL G ++++GR VVHE DDLGKGG+E S TGNAGGRLACGV+G+ Sbjct: 9 LKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.456e-40 Identity = 78/144 (54.17%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G + Q E GP V +TGL G HG H+H++GD T GC S G HFNP + HG P+DE RH GDLGN+ A +GVA+ +I D+ ISL G ++++GR VVHE DDLGKGG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC1_DICDI (Superoxide dismutase [Cu-Zn] 1 OS=Dictyostelium discoideum GN=sodA PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.902e-40 Identity = 84/145 (57.93%), Postives = 98/145 (67.59%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 +KG V GVV TQE+ P TVN +TGL G HG H+H +GDTTNGC+S G HFNP HGAP DE RH GDLGNIVA+ + TI D ISL G +T+VGR VVH +DDLGKGG SLTTG AG RL CGV+G++ Sbjct: 9 IKG-EKVNGVVKFTQENKDSPVTVNYDITGLEKGEHGFHVHAFGDTTNGCVSAGPHFNPFGKNHGAPSDEDRHVGDLGNIVADGESNTKGTISDKIISLFGEHTIVGRTMVVHADQDDLGKGGKPDSLTTGAAGARLGCGVIGVS 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.484e-40 Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 1 Query: 376 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKG---GHELSLTTGNAGGRLACGVVGL 786 V G++ Q+ +G PTTV V GLTPG HG H+H+YGDTTNGC+S G HFNP N THG DE+RH GDLGNI A A+G A +I D I L GPN+++GR+ VVH +DDLGKG + SL TGNAG R+ACG+V + Sbjct: 14 VSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVACGIVAI 154
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.484e-40 Identity = 76/143 (53.15%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG VEG + Q+ GP V+ +TGLT G HG H+H++ D T GC S G HFNP + HG PKD+ RH GDLGN+ A +GVA +I D+ I+L G +++GR VVHE DDLGKG +E S TGNAG RLACGV+G+ Sbjct: 9 LKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKGDNEESTQTGNAGSRLACGVIGI 151
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 82/150 (54.67%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGP-TTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGG---HELSLTTGNAGGRLACGVVGLTPV 795 L+G + V G++ Q GG TT++ V+GLTPG HG H+H+YGD TNGC S G H+NP THG P D ++H GDLGNIVA ANGVAE I I L GP +V+G + VVH DDLG+G E SL TGNAG RLACGV+G+ V Sbjct: 51 LRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQGTGNMREESLKTGNAGSRLACGVIGIAAV 200 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |