CK935660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 79/142 (55.63%), Postives = 97/142 (68.31%), Query Frame = 1 Query: 373 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 + +G V QED P V +TGL G HG H+HE+GD TNGCMS+G HFNP N HGAP DE RH GDLGNI A +G + I D++I+L G N++VGR VVH DDLGKGGHELS +TGNAG R+ CGV+G+ + Sbjct: 12 DAKGTVYFEQEDACAPVKVCGEITGLNKGQHGFHVHEFGDNTNGCMSSGPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSKITLFGENSIVGRTVVVHADPDDLGKGGHELSKSTGNAGARIGCGVIGICKI 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 78/143 (54.55%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G + + G V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD+ ISL G +++GR VVHE DDLG+GG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGTIHF-EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 79/145 (54.48%), Postives = 103/145 (71.03%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG + V GVV QE D TT++ +TG P HG H+HE+GD TNGC S+G+HFNP THG+P+DE RH GD+GN++A+ANGVA + D I + GP +++GR VVH +DDLG+GG+E SL TGNAG R ACGV+G+ Sbjct: 8 LKGDAGVSGVVHFEQEADAAVTTISWNITGFEPNTEHGFHIHEFGDVTNGCTSSGSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 5.534e-40 Identity = 77/143 (53.85%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G + + G V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA+ IVD+ ISL G ++++GR VVHE DDLG+GG+E S TGNA RLACGV+G+ Sbjct: 9 LKGDGPVQGTIRF-EAKGHTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLACGVIGI 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_YEAST (Superoxide dismutase [Cu-Zn] OS=Saccharomyces cerevisiae GN=SOD1 PE=1 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 7.227e-40 Identity = 81/146 (55.48%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 789 LKG + V GVV Q + PTTV+ + G +P G H+HE+GD TNGC+S G HFNP THGAP DEVRH GD+GN+ + NGVA+ + D+ I L GP +VVGR+ V+H +DDLGKG E SL TGNAG R ACGV+GLT Sbjct: 8 LKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGLT 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 7.227e-40 Identity = 80/145 (55.17%), Postives = 100/145 (68.97%), Query Frame = 1 Query: 358 LKG-TSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG S V+G++ Q++ GP V + GLT G HG H+HE+GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA +I D+ ISL G + ++GR VVHE DDLGKGG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 9.439e-40 Identity = 78/143 (54.55%), Postives = 95/143 (66.43%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 786 LKG V+G + + G V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD ISL G +++GR VVHE DDLG+GG+E S TGNAG RLACGV+G+ Sbjct: 9 LKGDGPVQGTIHF-EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.233e-39 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVN--VRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 783 L+G G V QE G V + + GLTPG HG H+H +GD TNGC+S G HFNP + H PKDE RH GDLGN+ A+ANGVA+ I D +ISL GP +++GR V+HE DDLG+GG+E SL TGNAG RLACGV+G Sbjct: 9 LRGAGETTGTVYFEQE-GNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD-KISLTGPYSIIGRTMVIHEKADDLGRGGNEESLKTGNAGSRLACGVIG 150
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.610e-39 Identity = 78/142 (54.93%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 373 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 795 + +G V QE + P V VTGL G HG H+HE+GD TNGCMS+G HFNP HGAP DE RH GDLGNI A +G I D +I+L G N+++GR VVH DDLGKGGHELS TTGNAG R+ CGV+G+ + Sbjct: 4 DAKGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGIAKI 145
BLAST of CK935660 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 2.103e-39 Identity = 78/145 (53.79%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 358 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGLHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP 792 LKG V+G + + G V +TGLT G HG H+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD ISL G +++GR VVHE DDLG+GG+E S TGNAG LACGV+G+ P Sbjct: 9 LKGDGPVQGTIHF-EAKGDKVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLACGVIGIAP 152 The following BLAST results are available for this feature:
BLAST of CK935660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935660 ID=CK935660; Name=CK935660; organism=Citrus sinensis; type=EST; length=869bpback to top |