EY756595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_MOUSE (Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.638e-54 Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 2 Query: 230 QKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP--VPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 Q A E + D PN GNG DL NY WTQ L E+ ++VP V K + V+ +I++ HL+VGLKGQPP++DGEL+ VK ++ W IED K V++ L K N+MEWW L+ PEI+T+K+ PENSKLSDLD ETRS VEKMM+DQRQKSMGLP+SDE +KQE ++FM +HPEMDFS+A+ Sbjct: 143 QDAEDEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 330
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_RAT (Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.798e-53 Identity = 104/188 (55.32%), Postives = 133/188 (70.74%), Query Frame = 2 Query: 230 QKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP--VPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 Q A E + D PN GNG DL NY WTQ L E+ ++VP V K + V+ +I++ HL+VGLKGQ P+IDGEL+ VK ++ W IED K V++ L K N+MEWW L+ PEI+T+K+ PENSKLSDLD ETRS VEKMM+DQRQKSMGLP+SDE +KQE ++FM +HPEMDFS+A+ Sbjct: 143 QDAEEEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 330
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_BOVIN (Nuclear migration protein nudC OS=Bos taurus GN=NUDC PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.655e-53 Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 2 Query: 230 QKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP--VPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 Q+A E + D PN GNG DL +Y WTQ L E+ ++VP V K + V+ +I++ HL+VGLKGQP I+DGEL+ VK ++ W IED K V++ L K N+MEWW L+ PEI+T+K+ PENSKLSDLD ETRS VEKMM+DQRQKSMGLP+SDE +KQE ++FM +HPEMDFS+AR Sbjct: 143 QEAEEEEEEDDEKDKGKLKPNLGNGADLPSYRWTQTLSELDLAVPFCVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAR 330
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_CHICK (Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.389e-52 Identity = 101/187 (54.01%), Postives = 132/187 (70.59%), Query Frame = 2 Query: 233 KAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP--VPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 K + + D N PN GNG DL NY WTQ L E+ +++P V K + V+ +I++ L+VGLKG PP+IDGEL VK ++ W IED KTV++ L K N+MEWW L+ PEI+T+K+ PENSKLSDLD ETRS VEKMM+DQRQKSMGLP+SDE +KQ+ ++FM +HPEMDFS+A+ Sbjct: 153 KQETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAK 339
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_HUMAN (Nuclear migration protein nudC OS=Homo sapiens GN=NUDC PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.369e-52 Identity = 100/169 (59.17%), Postives = 128/169 (75.74%), Query Frame = 2 Query: 287 PNKGNGLDLENYSWTQILQEVTVSVP--VPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 PN GNG DL NY WTQ L E+ ++VP V K + ++ +I++ HL+VGLKGQP IIDGEL+ VK ++ W IED K V++ L K N+MEWW L+ PEI+T+K+ PENSKLSDLD ETRS VEKMM+DQRQKSMGLP+SDE +KQE ++FM +HPEMDFS+A+ Sbjct: 161 PNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 329
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_EMENI (Nuclear movement protein nudC OS=Emericella nidulans GN=nudC PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.662e-38 Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 320 YSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ--PPIIDGELHMAVKPDDCYWSIEDQ-----KTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 Y WTQ +++V V++PV A K R + +KK+ +KV +KG+ IDG+ +KP + W++E K VSI L K NQMEWW ++ P+ID K+ PENS LSDLD ETR+ VEKMM+DQRQK MG P+SDE +K + ++F EHPEMDFS A+ Sbjct: 34 YKWTQTIRDVDVTIPVSANLKGRDLDVVLKKDSIKVKVKGENGEVFIDGQFPHPIKPSESSWTLETTSKPPGKEVSIHLDKVNQMEWWAHVVTTAPKIDVSKITPENSSLSDLDGETRAMVEKMMYDQRQKEMGAPTSDEQRKMDILKKFQKEHPEMDFSNAK 196
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_DICDI (Nuclear movement protein nudC OS=Dictyostelium discoideum GN=nudc PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.015e-35 Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 314 ENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKV-GLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 + Y+W+Q L + T+S+ + KS+ + +I +HL V L IIDG+L+ VK DC W++E K + I L K EWW C+I+G EID +++P+NS LSD D ETR+ VEKM+++Q +K+ GLP++DE +KQ FE F EHP+MDFS A+ Sbjct: 11 DRYTWSQTLNDCTLSIKLENPVKSKDLFIKIDNDHLTVKNLITNDTIIDGKLYKNVKKSDCNWTLESGKNLEIELFKLKGQEWWSCIIQGESEIDVTQIKPQNSSLSDFDGETRAMVEKMLYNQNRKAQGLPTTDEEEKQRIFETFKNEHPDMDFSNAK 169
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC_SCHPO (Nuclear movement protein nudc OS=Schizosaccharomyces pombe GN=nudc PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.596e-32 Identity = 66/163 (40.49%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 305 LDLENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK--GQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQENFEEFMAEHPEMDFSRAR 787 L+ Y W Q + +V + + VP GT+++ + ++ + LK+ + + ++ G L + D+ W++E+Q+ + I L K N+MEWW C+IKG P ID +EPENSKLSDLD ETR+TVEKMM +Q QK +DE ++++ + FM +HPE+DFS R Sbjct: 6 LEEAEYEWDQTIADVDIVIHVPKGTRAKSLQVDMSNHDLKIQINVPERKVLLSGPLEKQINLDESTWTVEEQERLVIHLEKSNKMEWWSCVIKGHPSIDIGSIEPENSKLSDLDEETRATVEKMMLEQSQK-----RTDEQKRKDVLQNFMKQHPELDFSNVR 163
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC3_PONAB (NudC domain-containing protein 3 OS=Pongo abelii GN=NUDCD3 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16 Identity = 49/174 (28.16%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 224 KVQKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVPVPAG-TKSRFVLCEIKKNHLKVGL---KGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQE 733 +V + PP P++ + P+ NG ENY+W+Q ++ V VPVP K + V + + ++V + G+ +++G+L + + WS+E K V + L+K + WW +++G ID K+ E S ++ +D E ++ ++++ FD QK G P S E++ E Sbjct: 160 EVPREPPVLPRIQEQFQ--KNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVGEY-WWNAILEGEEPIDIDKINKERS-MATVDEEEQAVLDRLTFDYHQKLQGKPQSHELKVHE 329
BLAST of EY756595 vs. ExPASy Swiss-Prot
Match: NUDC3_HUMAN (NudC domain-containing protein 3 OS=Homo sapiens GN=NUDCD3 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15 Identity = 49/174 (28.16%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 224 KVQKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVPVPAG-TKSRFVLCEIKKNHLKVGL---KGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMMFDQRQKSMGLPSSDEMQKQE 733 +V + PP P++ + P+ NG ENY+W+Q ++ V VPVP K + V + + ++V + G+ +++G+L + + WS+E K V + L+K + WW +++G ID K+ E S ++ +D E ++ ++++ FD QK G P S E++ E Sbjct: 160 EVPREPPILPRIQEQFQ--KNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVGEY-WWNAILEGEEPIDIDKINKERS-MATVDEEEQAVLDRLTFDYHQKLQGKPQSHELKVHE 329 The following BLAST results are available for this feature:
BLAST of EY756595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756595 ID=EY756595; Name=EY756595; organism=Citrus sinensis; type=EST; length=922bpback to top |