EY728893

Overview
NameEY728893
Unique NameEY728893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ERWT9 (Probable sugar efflux transporter OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sotB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.273e-17
Identity = 52/194 (26.80%), Postives = 84/194 (43.30%), Query Frame = -2
Query:    1 LMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 582
            L+GWR TF V   V    +L  + LLP+L  E    +  +P  F  P      + + +   AH+ AY+Y+ PF ++ +G  G     LLL++G AG++G+       N+     LL    +I  S       AT       L  +WG           + +  +AP   +  M L   ++ + I  G+  GGQ+
Sbjct:  163 LLGWRITFAVIGAVAFVTMLLLLKLLPKLPSEHTGSLKSVPMLFRRPALVALYLLIAITVTAHYTAYSYIEPFIQSVAGLSGGFTTFLLLIFGAAGIVGSVLFSIYGNKFPATFLLAAIGLITLSMMCLYVSATHTLAVSTLCVIWGIAVMVMGLAVQVRVLALAPDATDVAMSLLSGIYNIGIGAGALLGGQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALTY (Probable sugar efflux transporter OS=Salmonella typhimurium GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAAESEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALTI (Probable sugar efflux transporter OS=Salmonella typhi GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALSV (Probable sugar efflux transporter OS=Salmonella schwarzengrund (strain CVM19633) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVICLLLLLPAANSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALPC (Probable sugar efflux transporter OS=Salmonella paratyphi C (strain RKS4594) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALPB (Probable sugar efflux transporter OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALHS (Probable sugar efflux transporter OS=Salmonella heidelberg (strain SL476) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALG2 (Probable sugar efflux transporter OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALEP (Probable sugar efflux transporter OS=Salmonella enteritidis PT4 (strain P125109) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALDC (Probable sugar efflux transporter OS=Salmonella dublin (strain CT_02021853) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  LL  + LLP+L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   NR     + +   ++     L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
SOTB_ERWT95.273e-1726.80Probable sugar efflux transporter OS=Erwinia tasma... [more]
SOTB_SALTY3.418e-1626.56Probable sugar efflux transporter OS=Salmonella ty... [more]
SOTB_SALTI3.418e-1626.56Probable sugar efflux transporter OS=Salmonella ty... [more]
SOTB_SALSV3.418e-1626.56Probable sugar efflux transporter OS=Salmonella sc... [more]
SOTB_SALPC3.418e-1626.56Probable sugar efflux transporter OS=Salmonella pa... [more]
SOTB_SALPB3.418e-1626.56Probable sugar efflux transporter OS=Salmonella pa... [more]
SOTB_SALHS3.418e-1626.56Probable sugar efflux transporter OS=Salmonella he... [more]
SOTB_SALG23.418e-1626.56Probable sugar efflux transporter OS=Salmonella ga... [more]
SOTB_SALEP3.418e-1626.56Probable sugar efflux transporter OS=Salmonella en... [more]
SOTB_SALDC3.418e-1626.56Probable sugar efflux transporter OS=Salmonella du... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bp
AATCTGCCCGCCAAAGAACGAGCCCACGGCAATGATCACCTGGAACAACG
CGACGAACAGCGGCATGCCACGTTCCACATCCTTGGGCGCCACCACAAAC
ATCCAGATACTCGCGCAGGCCGGGAAGGGGCCGAAGGGGAAGCCCCACAG
TGCGATCAGCATCACGGGGCCGCTCATGCCGGTGGCGAAATAAGGGAACA
GGGCAGTGCTGGTGCCGATCATCAGGGGCACCAACAACAAGGTGTGGCGC
ACGCTGCGGTTGGCGGCGAAACCGGCGAAAAAGTTGCCCATTAAGCCGGC
CACGCCGTATAACAGCAGCAGCGAGCCAATGGTCGGGCCGTCGAAACCGG
AGCTGTTTTTGAAGAACGGGGCGACATATGTGTATGCGGCAAAATGCGCG
AGGCCGATCAGCAGCACGGCGATCAAGCCGACCCGGGCTTGTGGGTTGAT
GAACANGGCCGGCAGGTCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGC
GCGGCAGCAGGAACATCTGCGCCAGCAGTACCGGGATGCCCACCAGCGCG
GTGACGAGGAAGGTCGTGCGCCACCCCATCAGGGCGCTCATCCAGTTGCC
GAGGGGTACGCCGAGGAGGGGTGGCAGGGTCCCGCCCACCATGAAGATCA
AGGTGCGCTTGCTGAGGCCACTCGCTTGGGGGCCAGACGGGGGCCCTAGA
AGGTCCCAGTGTACGTACTCCGGGTTGCACGGCCTGAGGTTTGTGTGGCG
TGCCCTCAGTTCGATTTGCGGGCGCTGGTGTGACGTCTGCTGGAGCGGGG
AAAGCGCGGAGGGGCGCCGCGGTGGAGCGTGCGCGCAGGCCCGGCTGCGC
GGGGAGGGGAAGTGAAGGCGGCTCCCAAGGGGGCTGGGATCG
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