EY728893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: OPDE_PSEAE (Transcription regulatory protein opdE OS=Pseudomonas aeruginosa GN=opdE PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.358e-19 Identity = 59/200 (29.50%), Postives = 90/200 (45.00%), Query Frame = -2 Query: 7 WMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAI----RISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 594 W+ L+GWR FL V + L Q LP + + + A P +G++A L + F+ +TYV PF + +G G + +LL+ G AG +G R TL+ +PL++ + + V+L+ LWG P W+ V P+D E G LFVA+ Q+ IA+GS GG Sbjct: 166 WLGTLIGWRGAFLCLVPVALVALAWQWTTLPSMRAGARAPGPGNVFTVFALLKRPGVMLGMLASSLFFMGQFSLFTYVRPFLETVTGVHGAHVSLVLLVIGAAGFIGTLLIDRVLQRRFFQTLVAIPLLMALIALVLTVLGGWPAIVVVLLGLWGLTGTSAPVGWWAWIARVFPEDAEAGGGLFVAVVQLSIALGSTLGG 365
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALPB (Purine ribonucleoside efflux pump nepI OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nepI PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.388e-17 Identity = 49/197 (24.87%), Postives = 94/197 (47.72%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + ++ +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAVIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALG2 (Purine ribonucleoside efflux pump nepI OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=nepI PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.388e-17 Identity = 49/197 (24.87%), Postives = 94/197 (47.72%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + ++ +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAVIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALEP (Purine ribonucleoside efflux pump nepI OS=Salmonella enteritidis PT4 (strain P125109) GN=nepI PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.388e-17 Identity = 49/197 (24.87%), Postives = 94/197 (47.72%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + ++ +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAVIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALTY (Purine ribonucleoside efflux pump nepI OS=Salmonella typhimurium GN=nepI PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALTI (Purine ribonucleoside efflux pump nepI OS=Salmonella typhi GN=nepI PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALPK (Purine ribonucleoside efflux pump nepI OS=Salmonella paratyphi A (strain AKU_12601) GN=nepI PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALPC (Purine ribonucleoside efflux pump nepI OS=Salmonella paratyphi C (strain RKS4594) GN=nepI PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALPA (Purine ribonucleoside efflux pump nepI OS=Salmonella paratyphi A GN=nepI PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SALCH (Purine ribonucleoside efflux pump nepI OS=Salmonella choleraesuis GN=nepI PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17 Identity = 49/197 (24.87%), Postives = 93/197 (47.21%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ ++GWR F A++G+ ++ + LP L E + + ++ + P G+IA+ + FA +TY+ P + N +GFD + +LL +G+A +G F+ + RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGGIIGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAAIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGG 361 The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bpback to top |