EY728893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALCH (Probable sugar efflux transporter OS=Salmonella choleraesuis GN=sotB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF + + LL + LLP+L E + + LP F P + +++ AH+ AY+Y+ PF +N +G LLL+ G AG++G+ G NR + + ++ L A + +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALA4 (Probable sugar efflux transporter OS=Salmonella agona (strain SL483) GN=sotB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF + + LL + LLP+L E + + LP F P + +++ AH+ AY+Y+ PF +N +G LLL+ G AG++G+ G NR + + ++ L A + +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ENT38 (Probable sugar efflux transporter OS=Enterobacter sp. (strain 638) GN=sotB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 59/195 (30.26%), Postives = 87/195 (44.62%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTA---LFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF L + LL + LLP+L E + + LP F P + +++ AH+ AY+Y+ PF + +GF LLL+ G AG++G+ G N +H LLV IG A L A + +L WG + + +AP + M LF +F + I G+ G QI Sbjct: 165 GWRTTFFAIGLGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQVVAGFSANFATVLLLILGGAGIIGSVLFGKLGN---KHASLLVSSAIGLLLACLLLLMPAAQSETHLAILSIFWGVAIMIIGLGMQVKVLALAPDATDVAMSLFSGIFNIGIGAGALVGNQI 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALPK (Probable sugar efflux transporter OS=Salmonella paratyphi A (strain AKU_12601) GN=sotB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16 Identity = 52/192 (27.08%), Postives = 84/192 (43.75%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF + + LL + LLP+L E + + LP F P + +++ AH+ AY+Y+ PF +N +G LLLL G AG++G+ G NR + + ++ L A + +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRCPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLLLGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALPA (Probable sugar efflux transporter OS=Salmonella paratyphi A GN=sotB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16 Identity = 52/192 (27.08%), Postives = 84/192 (43.75%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF + + LL + LLP+L E + + LP F P + +++ AH+ AY+Y+ PF +N +G LLLL G AG++G+ G NR + + ++ L A + +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRCPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLLLGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALNS (Probable sugar efflux transporter OS=Salmonella newport (strain SL254) GN=sotB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.830e-16 Identity = 51/192 (26.56%), Postives = 84/192 (43.75%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF + + LL + LLP+L E + + LP F P + +++ AH+ AY+Y+ PF +N +G LLL+ G AG++G+ G NR + + ++ L A + +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALISLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSEA7 (Probable sugar efflux transporter OS=Pseudomonas aeruginosa (strain PA7) GN=sotB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15 Identity = 57/193 (29.53%), Postives = 86/193 (44.56%), Query Frame = -2 Query: 1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579 +GWRTTF+ A + + LL + LP L + + + LP F P I +++ A F AY+Y+ PF + + G LLLL+G AG+ G+ + R LL L +GTS AL F+ + + L LWG F + +A + M LF L+ V I G+ G + Sbjct: 164 LGWRTTFMAIAGLSVLTLLYLVRSLPPLPSQNSGSLRSLPMLFRRPALVCLYILTVVVISAQFTAYSYIEPFARQVAQMGGEATTLLLLLFGGAGIFGSLLFSRYSEAFPRGFLLAAILALGTSLALLLPFSAQPTWLMALSVLWGMSIMCFGLAQQSRVLRLASDATDVAMALFSGLYNVGIGAGALLGSVV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECOL5 (Probable sugar efflux transporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=sotB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15 Identity = 53/192 (27.60%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A ML WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGMLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SHISS (Purine ribonucleoside efflux pump nepI OS=Shigella sonnei (strain Ss046) GN=nepI PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15 Identity = 49/197 (24.87%), Postives = 88/197 (44.67%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ L+GWR F A++G+ + + LP L E + + + P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFSVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SHIFL (Purine ribonucleoside efflux pump nepI OS=Shigella flexneri GN=nepI PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15 Identity = 49/197 (24.87%), Postives = 88/197 (44.67%), Query Frame = -2 Query: 7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597 +++ L+GWR F A++G+ + + LP L E + + + P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L PL++ S + + + + +WG F P S W+ E+ + VA+ Q+ G+ GG Sbjct: 165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361 The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bpback to top |