EY728893

Overview
NameEY728893
Unique NameEY728893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECOHS (Probable sugar efflux transporter OS=Escherichia coli O9:H4 (strain HS) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECODH (Probable sugar efflux transporter OS=Escherichia coli (strain K12 / DH10B) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECOBW (Probable sugar efflux transporter OS=Escherichia coli (strain K12 / BW2952) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO8A (Probable sugar efflux transporter OS=Escherichia coli O8 (strain IAI1) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO81 (Probable sugar efflux transporter OS=Escherichia coli O81 (strain ED1a) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO7I (Probable sugar efflux transporter OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO5E (Probable sugar efflux transporter OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO57 (Probable sugar efflux transporter OS=Escherichia coli O157:H7 GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO55 (Probable sugar efflux transporter OS=Escherichia coli (strain 55989 / EAEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO45 (Probable sugar efflux transporter OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
SOTB_ECOHS6.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECODH6.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECOBW6.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO8A6.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO816.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO7I6.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO5E6.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO576.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO556.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]
SOTB_ECO456.446e-1527.08Probable sugar efflux transporter OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bp
AATCTGCCCGCCAAAGAACGAGCCCACGGCAATGATCACCTGGAACAACG
CGACGAACAGCGGCATGCCACGTTCCACATCCTTGGGCGCCACCACAAAC
ATCCAGATACTCGCGCAGGCCGGGAAGGGGCCGAAGGGGAAGCCCCACAG
TGCGATCAGCATCACGGGGCCGCTCATGCCGGTGGCGAAATAAGGGAACA
GGGCAGTGCTGGTGCCGATCATCAGGGGCACCAACAACAAGGTGTGGCGC
ACGCTGCGGTTGGCGGCGAAACCGGCGAAAAAGTTGCCCATTAAGCCGGC
CACGCCGTATAACAGCAGCAGCGAGCCAATGGTCGGGCCGTCGAAACCGG
AGCTGTTTTTGAAGAACGGGGCGACATATGTGTATGCGGCAAAATGCGCG
AGGCCGATCAGCAGCACGGCGATCAAGCCGACCCGGGCTTGTGGGTTGAT
GAACANGGCCGGCAGGTCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGC
GCGGCAGCAGGAACATCTGCGCCAGCAGTACCGGGATGCCCACCAGCGCG
GTGACGAGGAAGGTCGTGCGCCACCCCATCAGGGCGCTCATCCAGTTGCC
GAGGGGTACGCCGAGGAGGGGTGGCAGGGTCCCGCCCACCATGAAGATCA
AGGTGCGCTTGCTGAGGCCACTCGCTTGGGGGCCAGACGGGGGCCCTAGA
AGGTCCCAGTGTACGTACTCCGGGTTGCACGGCCTGAGGTTTGTGTGGCG
TGCCCTCAGTTCGATTTGCGGGCGCTGGTGTGACGTCTGCTGGAGCGGGG
AAAGCGCGGAGGGGCGCCGCGGTGGAGCGTGCGCGCAGGCCCGGCTGCGC
GGGGAGGGGAAGTGAAGGCGGCTCCCAAGGGGGCTGGGATCG
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