EY728893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECOHS (Probable sugar efflux transporter OS=Escherichia coli O9:H4 (strain HS) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECODH (Probable sugar efflux transporter OS=Escherichia coli (strain K12 / DH10B) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECOBW (Probable sugar efflux transporter OS=Escherichia coli (strain K12 / BW2952) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO8A (Probable sugar efflux transporter OS=Escherichia coli O8 (strain IAI1) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO81 (Probable sugar efflux transporter OS=Escherichia coli O81 (strain ED1a) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO7I (Probable sugar efflux transporter OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO5E (Probable sugar efflux transporter OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO57 (Probable sugar efflux transporter OS=Escherichia coli O157:H7 GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO55 (Probable sugar efflux transporter OS=Escherichia coli (strain 55989 / EAEC) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ECO45 (Probable sugar efflux transporter OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWR TF + + LL + LLP L E + + LP F P + +++ AH+ AY+Y+ PF +N +GF +LLLL G AG++G+ G N+ + ++ AL A +L WG + + +AP + M LF +F + I G+ G Q+ Sbjct: 165 GWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356 The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bpback to top |