EY728893

Overview
NameEY728893
Unique NameEY728893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSEA8 (Probable sugar efflux transporter OS=Pseudomonas aeruginosa (strain LESB58) GN=sotB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 55/193 (28.50%), Postives = 84/193 (43.52%), Query Frame = -2
Query:    1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579
            +GWRTTF+  A + +  LL     LP L  + +  +  LP  F  P      +  +++  A F AY+Y+ PF K  +   G     LLLL+G AG+ G+      +    R  LL   L +G+S AL    +   +  + L  LWG     F       +  +A    +  M LF  L+ V I  G+  G  +
Sbjct:  164 LGWRTTFMAIAGLSVLTLLYLARSLPLLPSQNSGSLRSLPMLFRRPALVCLYVLTVVVISAQFTAYSYIEPFAKQVARMSGEATTLLLLLFGGAGIFGSILFSRYSEAFPRGFLLAAILALGSSLALLLPLSAQPTWLMALSLLWGMSIMCFGLAQQSRVLRLASDATDVAMALFSGLYNVGIGAGALLGSVV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_ECOL6 (Purine ribonucleoside efflux pump nepI OS=Escherichia coli O6 GN=nepI PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 48/197 (24.37%), Postives = 86/197 (43.65%), Query Frame = -2
Query:    7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597
            +++  L+GWR  F   A +G+  +   +  LP L  E + +  +       P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L   P ++  S  +   + +       +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG
Sbjct:  165 SFLGELIGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSYKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SHIDS (Purine ribonucleoside efflux pump nepI OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nepI PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 48/197 (24.37%), Postives = 86/197 (43.65%), Query Frame = -2
Query:    7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597
            +++  L+GWR  F   A++G+  +   +  LP L  + + +  +       P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L   PL++  S  +     +       +  +WG  F   P   S W         E+   + VA+ Q+    G+  GG
Sbjct:  165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGKPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLCGSDKIVATGVAIIWGLTFALVPVGWSTWSTRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSEU2 (Probable sugar efflux transporter OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sotB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 56/197 (28.43%), Postives = 87/197 (44.16%), Query Frame = -2
Query:    1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVM----LIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579
            +GWRTTFL  A +   V+   +  LP L  + +  +  LP  F  P+     +   ++  AHF AY+Y+ PF +  S   G     LLL++G AG+MG+      ++R     L+     IGT T L       +SG  +    L  +WG     F       +  +AP   +  M LF  +F + I  G+  G  +
Sbjct:  165 LGWRTTFLGIAAIAALVVFLLVRALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSLLSGEMTTILLLVFGGAGIMGSIIFSLFSDRFPNGLLITA---IGTLT-LCLLMLLPLSGDAVTLGTLTIIWGMAIMCFGLTLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 357          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PASMU (Probable sugar efflux transporter OS=Pasteurella multocida GN=sotB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14
Identity = 54/195 (27.69%), Postives = 93/195 (47.69%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGL-AHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGN-FFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIA-LWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF + AL+ I +L     LLP L  + A  ++ LP  F  P   +GL A+ +I + AHF AY+Y+ PF  N S         +L ++G++G+  +  F  +     +R  L  + L+  T+T L  + A+  +  + L+   WG           I +  +AP   +  M ++  ++ + I  G+  G Q+
Sbjct:  165 GWRATFAIIALIAIGILCLFYQLLPHLPSKNAGSLNSLPTLFKRPLL-LGLYALTMIIISAHFTAYSYIEPFMLNISTMSHSMATFVLFVFGLSGITASLLFNRYYNAGPIRFILFSMGLL--TATLLLLFIASQQTWTMFLLTFFWGIGIAGIGLGLQIRVLHLAPDATDVAMAIYSGIYNIGIGAGALLGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_ECO57 (Purine ribonucleoside efflux pump nepI OS=Escherichia coli O157:H7 GN=nepI PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.308e-14
Identity = 47/196 (23.98%), Postives = 84/196 (42.86%), Query Frame = -2
Query:    7 WMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 594
            ++  L+GWR  F   A +G+  +   +  LP L  E + +  +       P    G+IA+ +     FA +TY+ P +   +GF    +  +LL +G+A  +G   + F   RSV+  L   P ++  S  +   + +       +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG
Sbjct:  166 FLGELIGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMTLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSDKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSE14 (Probable sugar efflux transporter OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sotB PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 55/197 (27.92%), Postives = 84/197 (42.64%), Query Frame = -2
Query:    1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPV----MLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579
            +GWRTTFL  A +   V+      LP L  + +  +  LP  F  P+     +   ++  AHF AY+Y+ PF +  S   G     LLL++G AG+MG+      ++R     L+     IGT T         +SG       L  +WG     F       +  +AP   +  M LF  +F + I  G+  G  +
Sbjct:  165 LGWRTTFLGIAGIAALVVFLLARALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSRLSGEMTTILLLVFGGAGIMGSIIFSLFSDRFPNGLLITA---IGTLTVCL-LMLLPLSGDATALGTLTIIWGMAIMCFGLTLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 357          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: YBCL_BACSU (Uncharacterized MFS-type transporter ybcL OS=Bacillus subtilis GN=ybcL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 47/196 (23.98%), Postives = 93/196 (47.45%), Query Frame = -2
Query:    7 MSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANR-SVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 591
            ++  +GW++ F   AL+G+  ++   F LP  E +K + +    A F   +  +GL         +  AYTY++P+  N SG +G  +  +LL++G+A L+G+ F G++ ++  V  TL+    +   +  L         G ++++ LW F            +  + P+     + +  ++ Q  +AVG+  GG
Sbjct:  152 IAVALGWKSVFGAIALLGLIAMVVIFFTLPYTEGDKPVPLLQQLALFKKRKVAMGLSITFFWLGGYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLSLVTHSYIGVLVILILWSFAAWSTGPTQQFHLATIEPEMSGVLLSMNQSMMQFAMAVGAGIGG 347          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSESM (Probable sugar efflux transporter OS=Pseudomonas syringae pv. tomato GN=sotB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 55/197 (27.92%), Postives = 86/197 (43.65%), Query Frame = -2
Query:    1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLI----ALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579
            +GWRTTFL  A V   V+      LP L  + +  +  LP  F  P+     +   ++  AHF AY+Y+ PF +  S   G     LLL++G AG+MG+      ++R     L+     IGT  A+       +SG   ++     +WG     F       +  +AP   +  M LF  +F + I  G+  G  +
Sbjct:  169 LGWRTTFLGIAGVAALVVFLLARALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSRLSGEMTTILLLVFGGAGIMGSIVFSLFSDRFPNGLLITA---IGT-LAVCLLMLLPLSGDATMLGTLTVVWGMAIMCFGLLLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ERWCH (Sugar efflux transporter B OS=Erwinia chrysanthemi GN=sotB PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.619e-13
Identity = 52/195 (26.67%), Postives = 89/195 (45.64%), Query Frame = -2
Query:    1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGL-IAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGN-FFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579
            +GWR TFL  A      ++    LLP L  E +  +  +P  F  P A VG+ +  +++  AHF AY+Y+ PF +  +G        +LLL+G AG+ G+  ++ ++    +   +  + L++   T L P       G  +L  +WG             +  +AP   +  M +F  LF + I  G+  G Q+
Sbjct:  164 LGWRVTFLTIAAGATVAMILLARLLPLLPSEHSGSLGSVPKLFRRP-ALVGIYLLTVVVVTAHFTAYSYIEPFIQTVAGLPENFTTLILLLFGCAGIAGSMLYSRYSDRFPIGFLVTAMLLLLACLTLLMPLSGYPF-GLTLLCLVWGLAMMSIGLAMQAKVLSLAPDASDVAMSIFSGLFNLGIGGGALLGSQV 356          
The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
SOTB_PSEA82.449e-1428.50Probable sugar efflux transporter OS=Pseudomonas a... [more]
NEPI_ECOL62.449e-1424.37Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
NEPI_SHIDS3.199e-1424.37Purine ribonucleoside efflux pump nepI OS=Shigella... [more]
SOTB_PSEU25.457e-1428.43Probable sugar efflux transporter OS=Pseudomonas s... [more]
SOTB_PASMU7.127e-1427.69Probable sugar efflux transporter OS=Pasteurella m... [more]
NEPI_ECO579.308e-1423.98Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
SOTB_PSE142.074e-1327.92Probable sugar efflux transporter OS=Pseudomonas s... [more]
YBCL_BACSU3.537e-1323.98Uncharacterized MFS-type transporter ybcL OS=Bacil... [more]
SOTB_PSESM3.537e-1327.92Probable sugar efflux transporter OS=Pseudomonas s... [more]
SOTB_ERWCH4.619e-1326.67Sugar efflux transporter B OS=Erwinia chrysanthemi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bp
AATCTGCCCGCCAAAGAACGAGCCCACGGCAATGATCACCTGGAACAACG
CGACGAACAGCGGCATGCCACGTTCCACATCCTTGGGCGCCACCACAAAC
ATCCAGATACTCGCGCAGGCCGGGAAGGGGCCGAAGGGGAAGCCCCACAG
TGCGATCAGCATCACGGGGCCGCTCATGCCGGTGGCGAAATAAGGGAACA
GGGCAGTGCTGGTGCCGATCATCAGGGGCACCAACAACAAGGTGTGGCGC
ACGCTGCGGTTGGCGGCGAAACCGGCGAAAAAGTTGCCCATTAAGCCGGC
CACGCCGTATAACAGCAGCAGCGAGCCAATGGTCGGGCCGTCGAAACCGG
AGCTGTTTTTGAAGAACGGGGCGACATATGTGTATGCGGCAAAATGCGCG
AGGCCGATCAGCAGCACGGCGATCAAGCCGACCCGGGCTTGTGGGTTGAT
GAACANGGCCGGCAGGTCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGC
GCGGCAGCAGGAACATCTGCGCCAGCAGTACCGGGATGCCCACCAGCGCG
GTGACGAGGAAGGTCGTGCGCCACCCCATCAGGGCGCTCATCCAGTTGCC
GAGGGGTACGCCGAGGAGGGGTGGCAGGGTCCCGCCCACCATGAAGATCA
AGGTGCGCTTGCTGAGGCCACTCGCTTGGGGGCCAGACGGGGGCCCTAGA
AGGTCCCAGTGTACGTACTCCGGGTTGCACGGCCTGAGGTTTGTGTGGCG
TGCCCTCAGTTCGATTTGCGGGCGCTGGTGTGACGTCTGCTGGAGCGGGG
AAAGCGCGGAGGGGCGCCGCGGTGGAGCGTGCGCGCAGGCCCGGCTGCGC
GGGGAGGGGAAGTGAAGGCGGCTCCCAAGGGGGCTGGGATCG
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