EY728893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: YDHP_ECO57 (Inner membrane transport protein ydhP OS=Escherichia coli O157:H7 GN=ydhP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = -2 Query: 142 WMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWG 594 W+ +GWR +FL TA +G+ +++ F LP+ + A + PQ L+ +L A F YTY++P ++ + + ++L+L GV +GN+ G A+RSV TL L++ P+ A G + +A+WG Sbjct: 151 WLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNKFGAAISMAVWG 301
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_MANSM (Probable sugar efflux transporter OS=Mannheimia succiniciproducens (strain MBEL55E) GN=sotB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12 Identity = 47/193 (24.35%), Postives = 86/193 (44.56%), Query Frame = -2 Query: 1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVM-LIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576 GWRTTF + + +L+ + LLP++ + A + LP P I +L+ AHF AY+Y+ PF ++LL++GV+G++ + R LL + I T + Y +G+SG + L+ +WG + + +AP + ++ ++ + I G+ G Q+ Sbjct: 165 GWRTTFTLIGVFAALILILIVRLLPKIPSQNAGSLKSLPVLARRPMLITLYIFTILVISAHFTAYSYIEPFMIQIGRVSANKATAVLLIFGVSGVVASVLFS-RLYRIAPIKFLLSSVAILTLALICLYGVSGISGAIFALVFIWGVAISALSLAMQMKVLQLAPDATDVATAIYSGIYNIGIGGGALIGNQV 356
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: YDHP_ECOLI (Inner membrane transport protein ydhP OS=Escherichia coli (strain K12) GN=ydhP PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12 Identity = 42/151 (27.81%), Postives = 73/151 (48.34%), Query Frame = -2 Query: 142 WMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWG 594 W+ +GWR +FL TA +G+ +++ F LP+ + A + PQ L+ +L A F YTY++P ++ + + ++L+L GV +GN+ G A+RSV TL L++ P+ A G + + +WG Sbjct: 151 WLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWG 301
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSEPW (Probable sugar efflux transporter OS=Pseudomonas putida (strain W619) GN=sotB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11 Identity = 56/197 (28.43%), Postives = 83/197 (42.13%), Query Frame = -2 Query: 10 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLL--VPLMIGTSTALFP-----YFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 579 +GWR TFL A V + +L M LP L + + + LP F P + + V L+ A F AY+Y+ PF + G I LLLL+G AG+ G+ ++R H LL+ + L+ L P Y G+S WG F +A + M LF ++ + I G+ G Sbjct: 170 LGWRVTFLSIAGVALATMLCLMKSLPLLPSQNSGSLRSLPILFKRPALVITYVLVTLVITAQFTAYSYIEPFALQVAQISGERITLLLLLFGGAGVFGSVLFSRYSDR-FPHGLLVGSIGLLAACLLLLLPLAGNFYLFAGLS------MFWGVAILSFSLSLQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: YFHI_BACSU (Uncharacterized MFS-type transporter yfhI OS=Bacillus subtilis GN=yfhI PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11 Identity = 47/199 (23.62%), Postives = 87/199 (43.72%), Query Frame = -2 Query: 1 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 597 +++ ++ WR F + +G+ L M +P +P+ + + F + Q +L F AYT++ P ++S+GF I L YG+ G+ GNFFAG + T++ V + + A+FPY A + ++ L+G P + + + V+ F + A+G++ GG I Sbjct: 155 SYLGDVLNWRAVFSIITALGVIGFLGLMAAVPNRKPKVIPMLMNEWGVFKHKQVLFSFAITILGYSGVFIAYTFIEPILRHSAGFSTVGITGALFAYGLGGVAGNFFAGKVPLPLLTRTMIGVMIGLIGVLAVFPYIAIYPAAAIVATFLFGACAFGTPPLLQTKVISSSEGGTTIAAAVSVSAFNLANALGAWIGGMI 353
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_PSEE4 (Probable sugar efflux transporter OS=Pseudomonas entomophila (strain L48) GN=sotB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11 Identity = 52/195 (26.67%), Postives = 83/195 (42.56%), Query Frame = -2 Query: 10 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGN-FFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIA----LWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 579 +GWR TFL A V + +L M LP L + + + LP F P + + V L+ A F AY+Y+ PF + + G LLLL+G AG+ G+ F+ ++ ++ + + L P +SG L A +WG F +A + M LF ++ + I G+ G Sbjct: 170 LGWRITFLCIAGVALATMLCLMKSLPLLPSQNSGSLRSLPILFKRPALVITYLLVTLVITAQFTAYSYIEPFALHVAQIGGERTTLLLLLFGGAGVFGSLLFSRYSERFPHGFLVMAIAALAACLLLLLP-----LSGNFYLFAGLSMVWGMAILSFGLALQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_HAEI8 (Probable sugar efflux transporter OS=Haemophilus influenzae (strain 86-028NP) GN=sotB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11 Identity = 48/195 (24.62%), Postives = 86/195 (44.10%), Query Frame = -2 Query: 10 LMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHT---LLLVPLMIGTSTALFPYFAT-GMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 582 L+GWR TF + A++ + ++ + LLP L + A I+ LP P + ++ AHF AYTY+ PF + D ++LL++G +G+ A NR R ++V + + + L F+T + L+ +WG + + +AP + ++ +F I G+ FG Sbjct: 163 LVGWRVTFGIIAVLALSIMFLIIRLLPNLPSKNAGSIASLPLLAKRPLLLWLYVTTAIVISAHFTAYTYIEPFMIDVGHLDPNFATAVLLVFGFSGIA----ASLLFNRLYRFAPTKFIVVSMSLLMFSLLLLLFSTEAIIAMFSLVFIWGIGISCIGLSLQMRVLKLAPDATDVATAIYSGIFNAGIGAGALFG 353
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_HELAH (Probable sugar efflux transporter OS=Helicobacter acinonychis (strain Sheeba) GN=sotB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11 Identity = 51/194 (26.29%), Postives = 86/194 (44.33%), Query Frame = -2 Query: 10 LMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLA-HFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNF-FAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVML-IALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 582 ++ WR+TF + V + V L LLP L A +S LP P VG+ ++++ ++ HF Y+Y+ PF S F +L ++G+AG+MG+F F F + + L++ LF + + + L I LWG + + +AP + +F + V I G+ FG Sbjct: 164 MLDWRSTFGMIGGVALLVALLMYRLLPSLPSRNAGTLSSLPVLMKRPLL-VGIYLLVILAISGHFTTYSYIEPFIIQISQFSPEVATLMLFVFGLAGVMGSFLFGRFYEKNPKKFIACAIILVLCPQLLLFSF--KHLEWVIFLQIFLWGIGITSLGISLQMRVLQLAPNATDVASAIFSGSYNVGIGSGALFG 354
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ERWCT (Probable sugar efflux transporter OS=Erwinia carotovora subsp. atroseptica GN=sotB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11 Identity = 45/194 (23.20%), Postives = 84/194 (43.30%), Query Frame = -2 Query: 1 MGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGN-FFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 579 +GWR TF++ L+ +++ M LLP L + + LP P ++I AHF AY+Y+ PF + LLL++G AG++G+ F+ +++ ++ + L P +G S + I +WG + + +A + M L+ ++ + I G+ G Q+ Sbjct: 162 LGWRVTFVLIGLIAAVIMVGLMKLLPVLPSSNSGSLKSLPLLLKRPALLCVYGLTVMIVTAHFTAYSYIEPFILKVALLSENFTTILLLIFGGAGIIGSMLFSRYSSKYPAGFLIVSFAFLAVCLLLLLPLSFSGWSLSTLCI-VWGIAIMALSLGMQVKVLTLASDATDVAMALYSGIYNIGIGGGALLGNQV 354 The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bpback to top |