EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.994e-46 Identity = 103/218 (47.25%), Postives = 139/218 (63.76%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL----KQHLYTCSRTRGDVL 710 +LPI E IGETGSGK+TQ++Q L GY G IG TQP +E G +LG+EVGYAIRFED TS T+IK++TDG+LLRE L +P+LS YSVIILDEAHER+++TD+L GL+K+ + R +LK+LITSATL+ EK SK+F N +PG+ +PV+I ++K+ YL+++L + HL S GD+L Sbjct: 507 SLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHL---SEPPGDIL 720
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_PANTR (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes GN=DHX16 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.108e-46 Identity = 96/216 (44.44%), Postives = 138/216 (63.89%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 +LP+ + E++ GETGSGK+TQ+ Q L GYT G+ I TQP +E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+ +PV+I ++K YLE+ + L ++ GD+L Sbjct: 401 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 615
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 5.108e-46 Identity = 96/216 (44.44%), Postives = 138/216 (63.89%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 +LP+ + E++ GETGSGK+TQ+ Q L GYT G+ I TQP +E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+ +PV+I ++K YLE+ + L ++ GD+L Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 612
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae GN=PRP22 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.376e-45 Identity = 94/229 (41.05%), Postives = 141/229 (61.57%), Query Frame = 3 Query: 21 LILLESSKPRVN*SMA--------------NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665 LI+ E K R+N S++ LP+ ++ +GETGSGK+TQ++Q L G++ G+IG TQP +E+G ++G +VGY IRFED T T IKY+TDG+L RE L +P++S YSVI+LDEAHER++ TD+L L+K+ ++ +LK+++TSATL+ K S++F NCP +N+PGK +PVE+L+S+ Y+E+AL Sbjct: 452 LIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAA-IKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAAL 679
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 OS=Caenorhabditis elegans GN=mog-4 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 2.146e-44 Identity = 96/229 (41.92%), Postives = 140/229 (61.14%), Query Frame = 3 Query: 33 ESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK--QHLYTCSRTRGDVL 710 E K + + +LP+ + + GETGSGK+TQL Q L+ G+ + G IG TQP E+G +LG +VGY+IRFED TSE+T++KY+TDG+LLRE L+ PDL+ YSV+++DEAHER+L+TDIL GLVK + R LK+LI+SATLD EK S FF + P +PG+ +PV+I +++ Y+++A+ ++ GD+L Sbjct: 351 EKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR-KDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDIL 578
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.803e-44 Identity = 98/216 (45.37%), Postives = 139/216 (64.35%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 LP+ + +E +GETGSGK+TQ+ Q + G + G ++GVTQP +E+ LGEEVGY+IRFE+ +S RT +KYLTDG+LLRE +S+P L+ Y VIILDEAHER+L+TDIL GL+K ++ R LK+++ SATL+ K K+F N P + VPG+L+PVEI +++E YLESA++ ++T T GD+L Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILK-RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGT-GDIL 290
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.781e-44 Identity = 102/229 (44.54%), Postives = 141/229 (61.57%), Query Frame = 3 Query: 48 RVN*SMA----NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESA----LKQHLYTCSRTRGDVL 710 R N SM +LPI ++ + +GETGSGK+TQ++Q G + G IG TQP +E G +LG +VGY IRFED TS+ T+IKY+TDG+LLRE L +PDLS YS+I+LDEAHER+++TD+L GL+K R +LK++ITSATLD K S++F P +PG+ +PVEIL+++E YLE+A ++ HL + GDVL Sbjct: 528 RTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR-PELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHL---TEPPGDVL 752
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP2_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 OS=Saccharomyces cerevisiae GN=PRP2 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.817e-43 Identity = 96/218 (44.04%), Postives = 142/218 (65.14%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI--IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 LP+ QY++++ +GETGSGK+TQL Q L G+T G I +TQP E+ V LG+EVGY IRFED+T+ +T++KY+TDG+LLRE L++ LS YS I++DEAHER+L TDIL+GL+K ++ R + LK+LI+SAT++ +K S+FF NCP NVPG+ YPV+I ++ + +Y+ +A+ ++T GD+L Sbjct: 223 LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPT-LKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDIL 439
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_PONAB (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Pongo abelii GN=DHX15 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42 Identity = 92/218 (42.20%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 LP+ +Y+++ +GETGSGK+TQ+ Q + + G + TQP E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+ +PVEI ++ E YLE+A++ ++ C GD+L Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_MOUSE (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus GN=Dhx15 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42 Identity = 92/218 (42.20%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 LP+ +Y+++ +GETGSGK+TQ+ Q + + G + TQP E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+ +PVEI ++ E YLE+A++ ++ C GD+L Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |