EY753754

Overview
NameEY753754
Unique NameEY753754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.994e-46
Identity = 103/218 (47.25%), Postives = 139/218 (63.76%), Query Frame = 3
Query:   69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL----KQHLYTCSRTRGDVL 710
            +LPI    E              IGETGSGK+TQ++Q L   GY   G IG TQP             +E G +LG+EVGYAIRFED TS  T+IK++TDG+LLRE L +P+LS YSVIILDEAHER+++TD+L GL+K+ +  R  +LK+LITSATL+ EK SK+F N     +PG+ +PV+I ++K+    YL+++L    + HL   S   GD+L
Sbjct:  507 SLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHL---SEPPGDIL 720          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_PANTR (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes GN=DHX16 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.108e-46
Identity = 96/216 (44.44%), Postives = 138/216 (63.89%), Query Frame = 3
Query:   69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710
            +LP+  + E++             GETGSGK+TQ+ Q L   GYT  G+ I  TQP             +E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+++DEAHER+L+TDIL GL+K +   R  +LK+L+ SAT+D  + S FF + P   +PG+ +PV+I ++K     YLE+ +   L    ++  GD+L
Sbjct:  401 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 615          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 5.108e-46
Identity = 96/216 (44.44%), Postives = 138/216 (63.89%), Query Frame = 3
Query:   69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710
            +LP+  + E++             GETGSGK+TQ+ Q L   GYT  G+ I  TQP             +E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+++DEAHER+L+TDIL GL+K +   R  +LK+L+ SAT+D  + S FF + P   +PG+ +PV+I ++K     YLE+ +   L    ++  GD+L
Sbjct:  398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDIL 612          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae GN=PRP22 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.376e-45
Identity = 94/229 (41.05%), Postives = 141/229 (61.57%), Query Frame = 3
Query:   21 LILLESSKPRVN*SMA--------------NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665
            LI+ E  K R+N S++               LP+     ++            +GETGSGK+TQ++Q L   G++  G+IG TQP             +E+G ++G +VGY IRFED T   T IKY+TDG+L RE L +P++S YSVI+LDEAHER++ TD+L  L+K+   ++  +LK+++TSATL+  K S++F NCP +N+PGK +PVE+L+S+     Y+E+AL
Sbjct:  452 LIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAA-IKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAAL 679          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 OS=Caenorhabditis elegans GN=mog-4 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 2.146e-44
Identity = 96/229 (41.92%), Postives = 140/229 (61.14%), Query Frame = 3
Query:   33 ESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK--QHLYTCSRTRGDVL 710
            E  K  +  +  +LP+  + +               GETGSGK+TQL Q L+  G+ + G  IG TQP              E+G +LG +VGY+IRFED TSE+T++KY+TDG+LLRE L+ PDL+ YSV+++DEAHER+L+TDIL GLVK +   R   LK+LI+SATLD EK S FF + P   +PG+ +PV+I +++     Y+++A+     ++      GD+L
Sbjct:  351 EKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR-KDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDIL 578          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.803e-44
Identity = 98/216 (45.37%), Postives = 139/216 (64.35%), Query Frame = 3
Query:   72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710
            LP+ + +E              +GETGSGK+TQ+ Q +   G  + G ++GVTQP             +E+   LGEEVGY+IRFE+ +S RT +KYLTDG+LLRE +S+P L+ Y VIILDEAHER+L+TDIL GL+K ++  R   LK+++ SATL+  K  K+F N P + VPG+L+PVEI +++E    YLESA++    ++T   T GD+L
Sbjct:   77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILK-RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGT-GDIL 290          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.781e-44
Identity = 102/229 (44.54%), Postives = 141/229 (61.57%), Query Frame = 3
Query:   48 RVN*SMA----NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESA----LKQHLYTCSRTRGDVL 710
            R N SM     +LPI   ++ +            +GETGSGK+TQ++Q     G  + G IG TQP             +E G +LG +VGY IRFED TS+ T+IKY+TDG+LLRE L +PDLS YS+I+LDEAHER+++TD+L GL+K     R  +LK++ITSATLD  K S++F   P   +PG+ +PVEIL+++E    YLE+A    ++ HL   +   GDVL
Sbjct:  528 RTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR-PELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHL---TEPPGDVL 752          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP2_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 OS=Saccharomyces cerevisiae GN=PRP2 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.817e-43
Identity = 96/218 (44.04%), Postives = 142/218 (65.14%), Query Frame = 3
Query:   72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI--IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710
            LP+ QY++++            +GETGSGK+TQL Q L   G+T  G   I +TQP              E+ V LG+EVGY IRFED+T+  +T++KY+TDG+LLRE L++  LS YS I++DEAHER+L TDIL+GL+K ++  R + LK+LI+SAT++ +K S+FF NCP  NVPG+ YPV+I ++ +   +Y+ +A+     ++T     GD+L
Sbjct:  223 LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPT-LKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDIL 439          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_PONAB (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Pongo abelii GN=DHX15 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42
Identity = 92/218 (42.20%), Postives = 135/218 (61.93%), Query Frame = 3
Query:   72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710
            LP+ +Y+++             +GETGSGK+TQ+ Q    +  +  G    +  TQP              E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L  Y VIILDEAHER+L TDIL+G++K +V  R S LK+++ SATLD  K   +F NCP L +PG+ +PVEI ++ E    YLE+A++    ++ C    GD+L
Sbjct:  137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353          
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_MOUSE (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus GN=Dhx15 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42
Identity = 92/218 (42.20%), Postives = 135/218 (61.93%), Query Frame = 3
Query:   72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710
            LP+ +Y+++             +GETGSGK+TQ+ Q    +  +  G    +  TQP              E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L  Y VIILDEAHER+L TDIL+G++K +V  R S LK+++ SATLD  K   +F NCP L +PG+ +PVEI ++ E    YLE+A++    ++ C    GD+L
Sbjct:  137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353          
The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
DHX8_DICDI2.994e-4647.25ATP-dependent RNA helicase dhx8 OS=Dictyostelium d... [more]
DHX16_PANTR5.108e-4644.44Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX16_HUMAN5.108e-4644.44Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP22_YEAST7.376e-4541.05Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
DHX16_CAEEL2.146e-4441.92Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX15_DICDI2.803e-4445.37Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
MOG5_CAEEL4.781e-4444.54Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP2_YEAST1.817e-4344.04Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
DHX15_PONAB1.538e-4242.20Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX15_MOUSE1.538e-4242.20Putative pre-mRNA-splicing factor ATP-dependent RN... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bp
CACGATAAAATCCTAAAACCCTAATCTTGCTCGAAAGCTCCAAACCTCGA
GTTAATTGATCGATGGCGAATCTTCCGATTCTCCAATATGAAGAAAAGAT
AGTAGAAACGGTGGAGCAGAATCCAGTGGTGGTGGTTATCGGAGAGACGG
GGTCCGGCAAGAGCACGCAGCTCTCTCAGATACTCCACCGACATGGCTAC
ACCAAATCCGGAATTATTGGCGTTACTCAGCCTCGCCGAGTCGCTGCCGT
ATCCGTTGCCAGACGAGTTGCACAGGAACTTGGTGTTCGGCTTGGGGAGG
AAGTAGGTTATGCAATACGATTTGAGGATAGAACATCGGAAAGAACACTT
ATTAAATACCTTACTGATGGAGTTCTTCTTCGAGAAATTCTGTCTAATCC
AGATCTTAGTCCGTATTCAGTTATCATATTAGATGAAGCCCATGAGAGGA
GTCTCAACACGGACATATTGCTGGGTCTTGTGAAACGCTTGGTTAATTTG
CGAGCATCAAAATTAAAGATTTTGATCACGTCAGCAACTCTTGATGGTGA
AAAAGTTTCCAAGTTCTTTTCAAATTGCCCCACATTGAATGTCCCTGGAA
AGTTGTATCCTGTGGAGATATTGCACAGCAAGGAGCGTNCCTACAGCTAT
CTTGAGTCTGCTTTGAAACAGCATTTGTATACATGTTCGAGAACCAGAGG
TGACGTGTTGANTTCATGACTGGACAGATGAATTANAAAGCTAGTTTAAA
GGTAGAAGATAATTCAAAGCTGNATGAAGGTCCTGCATGATGCTGAATCC
TCCCCTCATGGNTCTTGCACCGAAAGCAGGTCGTGTATTTATCCTCCCCT
CCAATGTAGGCAT
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