EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP16_HUMAN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 3.303e-53 Identity = 110/214 (51.40%), Postives = 141/214 (65.89%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 LPI ++++ +GETGSGK+TQL+Q LH GYT G+IG TQP +E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +PV+IL SK Y+E+A+KQ L S GD+L Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDIL 744
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP16_BOVIN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus GN=DHX38 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.303e-53 Identity = 110/214 (51.40%), Postives = 141/214 (65.89%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 LPI ++++ +GETGSGK+TQL+Q LH GYT G+IG TQP +E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +PV+IL SK Y+E+A+KQ L S GD+L Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDIL 744
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.894e-49 Identity = 108/233 (46.35%), Postives = 148/233 (63.52%), Query Frame = 3 Query: 15 KTLILLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 KT + SK + +LPI + ++++ IGETGSGK+TQ++Q L GYT G IG TQP +E G RLGEEVGYAIRFED T T+IKY+TDG+LLREIL + +LS YSVI+LDEAHER+++TD+L GL+K+L+ R L++++TSATLD EK S +F NC +PG+ +PVEIL++K+ YL++AL L + GD+L Sbjct: 496 KTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLD-LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDIL 727
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: MOG1_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans GN=mog-1 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 3.779e-49 Identity = 97/201 (48.26%), Postives = 135/201 (67.16%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFF-SNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ 671 LP+ +K+ +GETGSGK+TQL+Q L G+ SG+IG TQP E+GV LG++VGYAIRFED TSE+T+IKY+TDG+LLRE L + L YS II+DEAHERSLNTD+L GL++ ++ RA LK+++TSAT+D +K + FF NCPT +PG+ +PVE+ H++ Y+++A+KQ Sbjct: 441 LPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRAD-LKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQ 640
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP16_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 OS=Schizosaccharomyces pombe GN=prp16 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.436e-48 Identity = 101/214 (47.20%), Postives = 140/214 (65.42%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 LP E++ +GETGSGK+TQL+Q L+ GY ++G+IG TQP +E+GVRLG VGY+IRFED T T+IKY+TDGVLLRE L +L YSVII+DEAHERSLNTDIL+GL+K++++ R +K+L+TSAT++ +K S FF P +PG+ YPV+I+ +K Y+E+A++Q L S+ GD+L Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLS-RRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDIL 704
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: CDC28_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 OS=Schizosaccharomyces pombe GN=cdc28 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.876e-48 Identity = 104/219 (47.49%), Postives = 142/219 (64.84%), Query Frame = 3 Query: 60 SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 S +LP+ QY++ + + ETGSGK+TQL Q LH GYTK I TQP +E+ VRLG+EVGY+IRFE+ TSE+T+IKYLTDG+LLRE L+ PDL+ YSVII+DEAHER+L+TDIL GLVK + R LK+LI+SAT+D EK S +F P VPG+ YPV+I ++ + +Y+++A+ L ++ GD+L Sbjct: 414 SRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPD-LKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDIL 631
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.074e-47 Identity = 96/199 (48.24%), Postives = 133/199 (66.83%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665 +LPI + +E++ IGETGSGK+TQ++Q L GYT G IG TQP +E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ YPVEIL++KE YL+++L Sbjct: 588 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR-QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL 785
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.074e-47 Identity = 96/199 (48.24%), Postives = 133/199 (66.83%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665 +LPI + +E++ IGETGSGK+TQ++Q L GYT G IG TQP +E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ YPVEIL++KE YL+++L Sbjct: 564 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR-QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL 761
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX16_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.344e-46 Identity = 91/199 (45.73%), Postives = 134/199 (67.34%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665 +LP+ Y E++ +GETGSGK+TQ+ Q LH G++K+G IG TQP +E+G +LG EVGY+IRFED TS++T+++Y+TDG+L+RE L+ PDL+ YSV+I+DEAHER+L+TDIL GL+K + R LK+LI+SAT+D E+ S +F PT N+PG+ Y V +++ YL++A+ Sbjct: 466 SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPD-LKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAV 663
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.293e-46 Identity = 101/215 (46.98%), Postives = 137/215 (63.72%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 LP+ + ++ +GETGSGK+TQ++Q L GYT S +IG TQP +E+G R+GEEVGY IRFED+TS T IKY+TDG+L RE L +P LS YSVIILDEAHER++ TD+L GL+K V L+ LK+++TSATLD E+ S +F CP +PG+ YPVEI+++K+ YL++AL + S GD+L Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTV-LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDIL 723 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |