EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens GN=DHX15 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42 Identity = 92/218 (42.20%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 LP+ +Y+++ +GETGSGK+TQ+ Q + + G + TQP E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+ +PVEI ++ E YLE+A++ ++ C GD+L Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP43_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 OS=Saccharomyces cerevisiae GN=PRP43 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.623e-42 Identity = 92/194 (47.42%), Postives = 132/194 (68.04%), Query Frame = 3 Query: 138 IGETGSGKSTQLSQ--ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT-CSRTRGDVL 710 +GETGSGK+TQ+ Q + + ++ + TQP +E+ V+LGEEVGY+IRFE++TS +T++KY+TDG+LLRE + + DLS YS IILDEAHER+L TDIL+GL+K++V R LKI+I SATLD EK ++F++ P L VPG+ YPVE+ ++ E YL+SA++ L + GD+L Sbjct: 115 VGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVK-RRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDIL 307
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_CAEEL (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.623e-42 Identity = 94/225 (41.78%), Postives = 137/225 (60.89%), Query Frame = 3 Query: 66 ANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYT--KSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 + LP+ +Y+EK +GETGSGK+TQ+ Q + G ++ ++ TQP +E+ V LG+EVGY+IRFED SERT++KY TDG+LLRE +++P L Y V+ILDEAHER+L TDIL+GL+K +V RA +K++I SATLD K ++F +CP L+VPG+ +PVEI + YLE+A++ ++ GD+L Sbjct: 74 SQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRAD-IKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDIL 297
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRH1_SCHPO (Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe GN=prh1 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41 Identity = 87/200 (43.50%), Postives = 127/200 (63.50%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK 668 NLPI + + + +GETGSGKSTQ+ Q L+ Y + G + +TQP E G RLGE+VGY+IRF+D TS++T IKYLTDG+LLRE++++P LS Y +ILDEAHER+L TD+LLG VK+++ R + L+++I SATL+ E+ S+FF + G+ YPV+I ++ YL++ L+ Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPA-LRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLR 293
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.461e-41 Identity = 90/199 (45.23%), Postives = 129/199 (64.82%), Query Frame = 3 Query: 138 IGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 +GETGSGK+TQ+ Q + + ++G TQP E+ V +GEEVGY+IRFED TS RT++KYLTDG+LLRE +++P L Y VIILDEAHER+L TD+L GL+K ++ R LK+++ SATL+ EK ++FS P + VPG+L+PVEI +++E YLE+A++ ++ C GD+L Sbjct: 87 VGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPD-LKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC-EPPGDIL 283
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: PRP16_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Saccharomyces cerevisiae GN=PRP16 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.880e-40 Identity = 101/236 (42.80%), Postives = 138/236 (58.47%), Query Frame = 3 Query: 27 LLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT--KSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRT-SERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ----HLYT-CSRTRGDVL 710 L SK + + LP+ + ++ IGETGSGK+TQL+Q L+ GY + I VTQP E+ V LG+EVGY+IRFED T SE T +K++TDG+LLRE L + L YS +I+DEAHERSLNTDILLG K L+ R LK++ITSAT++ +K S FF N P +PG+ +PV+ +++ Y+E+A+ Q HL CS GD+L Sbjct: 335 LFTPSKDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILL-ARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCS--SGDIL 567
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_SCHPO (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 OS=Schizosaccharomyces pombe GN=prp43 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.455e-40 Identity = 94/201 (46.77%), Postives = 124/201 (61.69%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQIL--HRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK 668 LP+ Q E+ +GETGSGK+TQ+ Q + + + I TQP E+ V LGEEVGY IRFED + TL+KY+TDG+LLRE +++ LS YS IILDEAHER+L TDIL+GL+KRL R LKI++ SATLD +K K+F + P L VPG+ YPVEI +++E YLE+AL+ Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLAT-RRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALR 274
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX40_MOUSE (Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.330e-40 Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 75 PILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 614 PI + +K+ G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+LS +SVIILDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG+LYPV Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPV 237
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX40_PONAB (Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.219e-39 Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 75 PILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 614 PI + +KI G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG+LYPV Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPV 237
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX40_HUMAN (Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.219e-39 Identity = 84/184 (45.65%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 75 PILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 614 PI + +KI G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG+LYPV Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPV 237 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |