EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX40_RAT (Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus GN=Dhx40 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.079e-39 Identity = 83/184 (45.11%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 75 PILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 614 PI + +K+ G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG+LYPV Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPV 237
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHR2_YEAST (Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces cerevisiae GN=DHR2 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.760e-38 Identity = 90/215 (41.86%), Postives = 130/215 (60.47%), Query Frame = 3 Query: 3 R*NPKTLILLESSKPRVN*SMA---NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT--KSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSK 632 R N + ++ +S K R + + LP+ Q++ +I IGETGSGKSTQ+ Q + Y K G I VTQP QE G +LGE+VGY++RF++ T+ RT +KYLTDG+LLRE++ N DL YSVI++DEAHER++ TD++LG +K L+ L+I++ SATL EK S+FF+N P L V G+ + V+ + K Sbjct: 55 RSNKENVLTYKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX33_HUMAN (Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.733e-38 Identity = 85/203 (41.87%), Postives = 124/203 (61.08%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLV----KRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665 +LPILQ ++ IGETGSGK+TQ+ Q L+ G ++ GII VTQP E LG+ VGY +RF+D TSE T IK+LTDG+LLRE +S+ L YS +ILDEAHER+++TD+L G+V KR L LK+++ SAT+D + S++F+ P L + G+ +P+++ ++K+ YL +AL Sbjct: 73 SLPILQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTGIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAAL 275
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX33_MOUSE (Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.141e-37 Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLV----KRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESAL 665 +LPI + ++ IGETGSGK+TQ+ Q L+ G ++ GII VTQP E LG+ VGY +RFED TSE T IK+LTDG+LLRE +S+ L YS +ILDEAHER+++TD+L G+V KR L LK+++ SAT+D + S++F+ P L + G+ +P++I ++K+ YL +AL Sbjct: 64 SLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAAL 266
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: HRPA_HAEIN (ATP-dependent RNA helicase hrpA homolog OS=Haemophilus influenzae GN=hrpA PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.261e-36 Identity = 88/217 (40.55%), Postives = 125/217 (57.60%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHS---KERXYSYLESALKQHLYTCSRTRGDVL 710 +LP+ Q + +I GETGSGK+TQL ++ G+ G+IG TQP +EL LG VGY +RF D+ S+ T IK +TDG+LL EI ++ L+ YS +I+DEAHERSLN D +LG +K+L+ R LK++ITSAT+D E+ SK F+N P + V G+ YPVE+ + +E L+ L + RGD+L Sbjct: 82 SLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDIL 298
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: HRPA_ECOLI (ATP-dependent RNA helicase hrpA OS=Escherichia coli (strain K12) GN=hrpA PE=3 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 4.056e-35 Identity = 84/200 (42.00%), Postives = 116/200 (58.00%), Query Frame = 3 Query: 21 LILLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEI 620 ++L E+++P + NLP+ Q ++ I GETGSGK+TQL +I G G+IG TQP +EL G +GY +RF D S+ T++K +TDG+LL EI + L Y II+DEAHERSLN D LLG +K L+ R LKI+ITSAT+D E+ S+ F+N P + V G+ YPVE+ Sbjct: 61 VLLREAARPEIT-YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP-RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YK99_SCHPO (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Schizosaccharomyces pombe GN=SPAC20H4.09 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.919e-35 Identity = 79/202 (39.11%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGY-TKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFF--SNCPTLNVPGKLYPVEILHSKERXYSYLESALK 668 LPI +Y ++ +G TG GK+TQ+ Q L+ G+ +++GIIG TQP EL G GY+I+F+ SE+T IKY+TDG+LL EI +P L YS++ILDE HER+L+TD+LLG++KR++ R + +++++SA++D K+S+FF T+++ GKL+PVE L ++ +Y++SA++ Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKR-NDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIE 225
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX35_HUMAN (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.919e-35 Identity = 90/244 (36.89%), Postives = 134/244 (54.92%), Query Frame = 3 Query: 9 NPKTLILLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS----------NCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYTCSRTRGD 704 NP + +E + + LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP +E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSVI+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+ C L V G+ +PV+I + + Y++S + + + +T GD Sbjct: 40 NPYAALSIEQQRQK-------LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTV-ETVVKIHQTEGD 274
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX35_PONAB (Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.037e-35 Identity = 90/244 (36.89%), Postives = 134/244 (54.92%), Query Frame = 3 Query: 9 NPKTLILLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS----------NCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYTCSRTRGD 704 NP + +E + + LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP +E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSVI+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+ C L V G+ +PV+I + + Y++S + + + +T GD Sbjct: 40 NPYAALSIEQQRQK-------LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTV-ETVVKIHQTEGD 274
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX35_CAEEL (Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans GN=Y67D2.6 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.650e-34 Identity = 83/209 (39.71%), Postives = 122/209 (58.37%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPT----------LNVPGKLYPVEILHSKERXYSYLESAL 665 LPI + I +GETG GKSTQ+ Q L G+ G I +TQP +E LG +VGY +RF+D + + T +K++TDG+LLREIL++P LS YS+I++DEAHERS NTDILLGL+++++ +R + L+I+++SATLD E FF T ++V G+ +PV + H+K Y +SA+ Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIR-NDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAV 284 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |