EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHR1_YEAST (Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae GN=ECM16 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.554e-31 Identity = 85/223 (38.12%), Postives = 120/223 (53.81%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS------GIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRA----------SKLKILITSATLDGEKVSKFFSN-------CPTLNVPGKLYPVEILHSKERXYSYLESALKQ 671 LP+ E KI GETGSGK+TQ+ Q L+ G+ G++G+TQP ELG G +VGY IRF+ E T +K++TDGVLLRE++ + L+ YS II+DEAHER++NTDIL+G++ R V LRA KLK++I SATL +VS F N P L V + +PV I ++ ++Y + A ++ Sbjct: 391 LPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL---RVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRK 609
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: KZ_DROME (Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster GN=kz PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.641e-31 Identity = 89/212 (41.98%), Postives = 118/212 (55.66%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSKFFSNC-------PTLNVPGKLYPVEILHSKERXYSYLESALKQHL 677 LPIL E+++ GETGSGK+TQL Q L+ GY + +IGVT+P E+ + EV Y IRFE + T IK++TDGVLL+EI ++ LS YSVIILDEAHERS+ TDIL+GL+ R+V LR + LK++I SATL +VS F N P L V + +PV I K Y+ A ++ L Sbjct: 260 LPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATL---RVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTL 467
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YK16_SCHPO (Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces pombe GN=SPAPB1A10.06c PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.156e-28 Identity = 85/237 (35.86%), Postives = 121/237 (51.05%), Query Frame = 3 Query: 15 KTLILLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS-----GIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLR---------ASKLKILITSATLDGEKVSKFFSN-------CPTLNVPGKLYPVEILHSKERXYSYLESA 662 KT + + P + S LPI+ E++I G TGSGK+TQL Q L G++ G+I +TQP +EL +V Y IRF+ + T IK++TDG+LLRE+ S+ L+ YS +I+DEAHERS+NTDILLGL+ R+V LR LK++I SATL +V+ F N P + + + YPV I ++ YL+ A Sbjct: 379 KTTYTIINRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL---RVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDA 611
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX34_HUMAN (Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28 Identity = 73/185 (39.46%), Postives = 102/185 (55.14%), Query Frame = 3 Query: 66 ANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEI 620 A LPI QY +I G+TG GKSTQ+ Q L G++ + TQP E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FSN P + VPG+L+P+ + Sbjct: 160 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPD-LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITV 340
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX34_MOUSE (Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.803e-28 Identity = 72/190 (37.89%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 66 ANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKE 635 A LPI QY +I G+TG GKSTQ+ Q L G++ + TQP E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FS+ P + VPG+L+P+ +++ + Sbjct: 162 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPD-LKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQ 347
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: RHA2_CAEEL (Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans GN=rha-2 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 6.273e-28 Identity = 84/226 (37.17%), Postives = 123/226 (54.42%), Query Frame = 3 Query: 24 ILLESSKPRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXXXXXXXXXXQELGVRLG--EEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLR---ASKLKILITSAT--LDGEKVSKFFS--NCPTLNVPGKLYPVEILHSKERXYSYLESALKQ 671 +++E SK + S A LPI E +I GETGSGK+TQ+ Q L+ GY G +IG+T+P Q +GV L +EV Y IR+E SE T I ++TDGVL++E+ + L YSVI++DEAHERS+ +D+L+G++ R+V LR A L+++I SAT LD K F + V + +PV + K Y+ SA ++ Sbjct: 221 VIVERSK-EIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMA----QRVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRK 441
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX37_HUMAN (Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.193e-28 Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 45 PRVN*SMANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT-KSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTLNVPGKLYPVEILHSK 632 P + LPIL E+ I GETGSGK+TQ+ Q L+ G++ + IIGVT+P +E+ + V Y IR+E +E T IK++TDGVLL+EI + L Y V+I+DEAHERS+ TDIL+GL+ R+V LRA + LK+LI SATL E ++ F P + V + +PV + +K Sbjct: 243 PEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNK 445
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX29_MOUSE (ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.871e-26 Identity = 72/199 (36.18%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKE 635 LP+ ++ + I GETGSGKSTQ+ +L G K I+ TQP +ELG G GY IR E R SE T + Y T GVLLR++ + L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D +K S +F++CP L + G+ YPVE+ H ++ Sbjct: 571 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIV-CTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKR-SDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLED 767
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX15_STRPU (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 (Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25 Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 351 IKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ--HLYTCSRTRGDVL 710 IKY+TDG+LLRE +++P L Y VI+LDEAHER++ TDIL+GL+K V + S LK+++ SATLD K +F N P + VPG+ +PVEI ++ E YLE+A++ ++ C GDVL Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKE-VEKQRSDLKLVVMSATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVL 121
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25 Identity = 72/199 (36.18%), Postives = 105/199 (52.76%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKE 635 LP+ ++ + I GETGSGKSTQ+ +L+ +K I+ TQP ELG G GY IR E R E T + Y T GVLLR++ + LS S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++CP L + G+ YPVE+ H ++ Sbjct: 572 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIV-CTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLED 768 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |