EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.224e-23 Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILHRHGYTKSGIIG-----VTQPXXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKE 635 GETGSGKSTQ+ Q L G G TQP +ELG G GY IR E RT E T + Y T G+LLR++ + L S II+DE HER++ +D LL +++ +++ R S L +++ SAT+D EK S +F++CP + + G+ +PVE+ H ++ Sbjct: 589 GETGSGKSTQVPQFLLEDLLFNGGSPGKCNIVCTQPRRISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATRLLYCTTGILLRKLQEDSMLKNISHIIVDEVHERTVQSDFLLIILREILHKR-SDLHLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLED 762
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX30_HUMAN (Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.088e-23 Identity = 70/208 (33.65%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLY 680 LP+ + + I G+TG GK+T++ Q+L T+ + +TQP ELG L VG+ +R E + R + + T G+LLR++ SNP L S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP + VPG +YPV KE + + L +H Y Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPV-----KEHYLEDILAKLGKHQY 635
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX30_CHICK (Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.088e-23 Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-----IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKE 635 LP+ +++ I G+TG GK+T++ Q+L H Y G + +TQP QELG + + VGY +R E + R + + T G+LLR++ NP L S +++DE HER +NTD LL L+K + L L++++ SAT D ++ S +F CP + VPG +YPV+ + +E Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPD-LRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEE 669
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX30_RAT (Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.727e-23 Identity = 70/208 (33.65%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLY 680 LP+ + + I G+TG GK+T++ Q+L T+ + +TQP ELG L VG+ +R E + R + + T G+LLR++ SNP L S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP + VPG +YPV KE + + L +H Y Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPV-----KEHYLEDILAKLGKHQY 635
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX30_PONAB (Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.727e-23 Identity = 70/208 (33.65%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLY 680 LP+ + + I G+TG GK+T++ Q+L T+ + +TQP ELG L VG+ +R E + R + + T G+LLR++ SNP L S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP + VPG +YPV KE + + L +H Y Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPV-----KEHYLEDILAKLGKHQY 635
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX30_MOUSE (Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.727e-23 Identity = 70/208 (33.65%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLY 680 LP+ + + I G+TG GK+T++ Q+L T+ + +TQP ELG L VG+ +R E + R + + T G+LLR++ SNP L S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP + VPG +YPV KE + + L +H Y Sbjct: 457 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPV-----KEHYLEDILAKLGKHQY 658
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX30_BOVIN (Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.562e-23 Identity = 69/208 (33.17%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLY 680 LP+ + + I G+TG GK+T++ Q+L T+ + +TQP ELG L VG+ +R E + R + + T G+LLR++ SNP L S +++DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP + VPG +YPV KE + + L +H Y Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPV-----KEHYLEDILAKLGKHQY 661
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX32_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 OS=Homo sapiens GN=DHX32 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.935e-23 Identity = 66/180 (36.67%), Postives = 100/180 (55.56%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILHRH----GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK 668 G+ GKS Q+ Q + Y G+I TQ E+ V +G EVGY I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ HERS+ TD+LLGL+K ++ L +LK++I S+ K++ ++ N P + V K +PVE+++ E ES L+ Sbjct: 85 GDAKCGKSAQVPQWCAEYCLSIHYQHGGVI-CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVL-LARPELKLIINSSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILR 261
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX32_MOUSE (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 OS=Mus musculus GN=Dhx32 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22 Identity = 64/180 (35.56%), Postives = 101/180 (56.11%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILHRH----GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK 668 G++ GKS+Q+ Q + Y G+I TQ E+ V +G EVGY I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ HERSL TD+LLGL+K ++ L +LK+++ + L K+S ++ + P + V K +PVE+++ ES ++ Sbjct: 85 GDSKCGKSSQVPQWCAEYCLSIHYQHGGVI-CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVL-LARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIR 261
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX36_HUMAN (Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.717e-22 Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILH----RHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--EVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYTCSRTRG 701 GETG GK+TQ++Q + G + I TQP E G GY IR + R + I Y T G++L+ + S+P LS S I+LDE HER+L +D+L+ +VK L+N R S LK+++ SATL+ EK S++F NCP +++PG +PV + + E + +Q + C RG Sbjct: 230 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLLEDVIEKIRYVPEQKEHRCQFKRG 421 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |