EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YTDC2_MOUSE (Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.954e-21 Identity = 68/209 (32.54%), Postives = 112/209 (53.59%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILS-NPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT 683 +LP+ + +E+I +GETGSGK+TQ+ Q L + K+GI I TQP E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ + LS + +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + + G+ + V+ + +LE L+ YT Sbjct: 207 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQ-KHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEM--------FLEDILRTTGYT 405
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YTDC2_HUMAN (Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.954e-21 Identity = 68/209 (32.54%), Postives = 112/209 (53.59%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILS-NPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQHLYT 683 +LP+ + +E+I +GETGSGK+TQ+ Q L + K+GI I TQP E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ + LS + +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + + G+ + V+ + +LE L+ YT Sbjct: 192 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQ-KHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEM--------FLEDILRTTGYT 390
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YL419_YEAST (Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces cerevisiae GN=YLR419W PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21 Identity = 58/163 (35.58%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILHRHGYTKSGIIG-----VTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 614 GETGSGKSTQ+ Q + + G G TQP E V GEEVGY IR ++T T IK++T GVL+R + + + +++++DE HERS++TD+++ L+K L++ R +KI++ SAT++ + KFF T ++ G+ +P+ Sbjct: 627 GETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLH-RVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPI 788
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX57_MOUSE (Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 9.700e-21 Identity = 65/186 (34.95%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT----KSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 LP + E I G TG GK+TQ+ Q + + + I TQP +E R+G VGY IR E S T + Y T GVLLR + + L + II+DE HER+ +D LL ++K +V RA+ L++++ SATLD SK+FS CP + +PG+ +PV+ Sbjct: 545 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRAT-LQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 729
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: UCP12_SCHPO (Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces pombe GN=ucp12 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-----IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSN--PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 LP + KI GETGSGKSTQ+ Q + H Y SG + TQP E +G+EVGY++ E S+ TL+++ T G+LLR I + LS S +++DE HERS+ DILL L+K LV R LK+++ SAT++ + +F N L++ G+ +P++ Sbjct: 577 LPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDH-YLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLK-LVISRIPNLKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIK 763
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX57_HUMAN (Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20 Identity = 64/187 (34.22%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT----KSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 +LP + E I G TG GK+TQ+ Q + K I TQP +E R+G VGY IR E S T + Y T GVLLR + + L S II+DE HER+ +D LL ++K +V+ R L++++ SATL+ E S +F++CP + +PG+ +PV+ Sbjct: 543 SLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPG-LQVILMSATLNAELFSDYFNSCPVITIPGRTFPVD 728
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX36_MOUSE (Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.822e-20 Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILH----RHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--EVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 614 GETG GK+TQ++Q + G + I TQP E G GY IR + R + I Y T G++L+ + S+ LS S I+LDE HER+L +D+L+ ++K L++ R S LK+++ SATL+ EK S++F NCP +++PG +PV Sbjct: 223 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 386
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX32_XENLA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 OS=Xenopus laevis GN=dhx32 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.389e-19 Identity = 57/175 (32.57%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 153 SGKSTQLSQILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALK 668 SGKS+Q+ Q + G+ + G + TQ E+ V +G EVGY + FE+ + T+++Y TD +L RE++SNP LS Y V+I+D+ +ER ++TD+LL +K + R ++IT +L G VS ++ N P + + VE +++ Y SAL+ Sbjct: 91 SGKSSQIPQWCAEYCLAGHYQHGAVVCTQAHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNPLLSSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITCPSLSGTLVS-YYGNAPLVEAE-NTHSVESVYTTSLPRDYFHSALR 263
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YG65_SCHPO (Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe GN=SPBC15C4.05 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19 Identity = 70/208 (33.65%), Postives = 100/208 (48.08%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXXXXXXXXXXXXQELG-----VRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYLESALKQ 671 LP + E I G+TG GKSTQ+ L + TK+G I VT+P QELG R E VGY++R + + + T + Y+T G LR + ++ + +I+DE HERS+++D+LL V L+ + LKI+I SATL+ EK +F + +PGK YPV YLE L Q Sbjct: 631 LPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLK-QHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRF--------YLEDILSQ 828
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: MLE_DROME (Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIG-----VTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 LPI +I G TG GK+TQ++Q + Y SG G VTQP +E +LG+ VGY++RFE I + T GVLLR++ + L S II+DE HER +N+D LL +++ +V+ L +++ SAT+D K SK+F CP L VPG+ +PV+ Sbjct: 384 LPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYI-LDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPD-LHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQ 567 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |