EY753754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DQX1_MOUSE (ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.236e-17 Identity = 66/198 (33.33%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILHRHGYTK---SGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK--RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERXYSYL-ESALKQHLYTCSRTR--GDVL 710 G+ GSGKSTQ+ Q + +G + VTQP E+ + LG E+GY+I ED T T++++ D + L+E+ S +SV+ILDEA ERS+ +D+L GL++ RL NL +++T L+ K F+ N P + VP + L K+ + L E+A + L C + GDVL Sbjct: 67 GDPGSGKSTQIPQWCAEFALARGFQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALE-PKFQAFWGNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVL 263
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX9_XENLA (ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17 Identity = 58/188 (30.85%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 69 NLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILH----RHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 +LP+ ++EE+I G TG GK+TQ+ Q + R+ I VTQP E G +G+ GY++RFE + + T GVLLR++ S + S +I+DE HER +NTD LL +++ ++ ++++++ SAT+D ++F NCP + V G+ +PV+ Sbjct: 389 SLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLESG--IRGISHVIVDEIHERDINTDFLLVVLRDVIQA-FPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQ 573
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YL540_MIMIV (Putative ATP-dependent RNA helicase L540 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L540 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17 Identity = 56/181 (30.94%), Postives = 104/181 (57.46%), Query Frame = 3 Query: 147 TGSGKSTQLSQI-LHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRT--SERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL-RASKLKILITSATLDGEKVSKFFSNCPT--LNVPGK-LYPVEILHSKERXYSYLESALK 668 TGSGKS + ++ LH Y +G + +T P + V+LGE +GYA + D++ +++ I Y+TDG+ + E + +P LS ++V+I+DEAHER + D++L ++ L+ LK++I SAT+D +K K+F++ + +++ G+ +P+E + SY++ L+ Sbjct: 68 TGSGKSVLIPKLALHYTNY--NGRVVMTLPKRIITLSAAIFSAKVSDVKLGESIGYAYKGSDKSMYNDQNKIIYVTDGIFVMEYVRDPLLSKFNVVIIDEAHERRIQIDLILLFLRTLLQSGNRPDLKVIIMSATIDTDKYQKYFNSVDSTVIDIAGQPNHPIETHFMDKPVTSYMKEGLE 246
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: YUM14_USTMA (Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis GN=UM11114 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17 Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 141 GETGSGKSTQLSQILHRH----GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRL---------GEEVGYAIRFEDRTSERTLIKYLTDGVLLREILS--NPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 GETG GK+TQ+ Q + G I VTQP E G +L G VGYAIR E R S + + T GVLLR + + + DL S +++DE HER++++D LL ++ L+ R S++K+++ SAT++ E + +F P +++PG+ + VE Sbjct: 759 GETGCGKTTQVPQFILDEAIEAGRGSECNIVVTQPRRVSAIGVASRVAVERGEKLDGKKKAVAPGSLVGYAIRGERRASRECRLLFTTTGVLLRRLGAGGDTDLKGISHVVVDEVHERNVDSDFLLLELRELLR-RNSRIKVVLMSATINQETFASYFGKAPCISIPGRTFAVE 931
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: HRPB_ECOLI (ATP-dependent RNA helicase hrpB OS=Escherichia coli (strain K12) GN=hrpB PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17 Identity = 57/185 (30.81%), Postives = 90/185 (48.65%), Query Frame = 3 Query: 63 MANLPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 M++LP+ ++ TG+GKST L L H II + +P + L + G+ VGY +R ++ T ++ +T+GVL R I +P+LS ++ILDE HERSL D+ L L+ + LK+LI SATLD +++ + P + G+ +PVE Sbjct: 1 MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKII-LLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVE 184
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DQX1_HUMAN (ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.110e-16 Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 141 GETGSGKSTQLSQ----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK--RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 596 GE GSGKSTQ+ Q G+ K G + VTQP E+ + LG EVGY+I ED T TL+++ D +LL+E+ S + V++LDEA ERS+ +D L GL++ RL L +++T L+ K+ F+ N P +++P Sbjct: 70 GEPGSGKSTQIPQWCAEFALARGFQK-GQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALE-PKLRAFWGNPPIVHIP 225
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DQX1_BOVIN (ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.449e-16 Identity = 61/161 (37.89%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 141 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK--RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 602 GE G GKSTQ+ Q +L R G+ K G + VTQP E+ + LG EVGY+I ED T TL+++ D +LL+E+ S V+ILDEA ERS+ +D+L GL++ RL +L +++T +L+ K+ F+ PT+ VP K Sbjct: 70 GEPGCGKSTQIPQWCAEFVLAR-GFQK-GWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVVTDPSLE-PKLQDFWGGPPTVCVPRK 227
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: TDRD9_HUMAN (Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16 Identity = 59/170 (34.71%), Postives = 89/170 (52.35%), Query Frame = 3 Query: 150 GSGKSTQLSQILHRHGYTKSGI--IGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEI---LHSKERXY 644 GSGKSTQL Q + H +S I VTQP +E LG VGY + E +E T + Y+T GVLL++I+S L ++ II+DE HER+ D LL +V++L+ + +K+++ SAT+ ++ + +F+ P N Y E+ HS E Y Sbjct: 4 GSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFA-VPVQNKMNPAYIFEVEGKPHSVEEYY 172
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX9_PONAB (ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16 Identity = 59/187 (31.55%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILH----RHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 LP+ ++E +I G TG GK+TQ+ Q + ++ I VTQP E G G+ GY++RFE I + T GVLLR++ + + S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V G+ YPV+ Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQ 571
BLAST of EY753754 vs. ExPASy Swiss-Prot
Match: DHX9_MOUSE (ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16 Identity = 61/187 (32.62%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 72 LPILQYEEKIXXXXXXXXXXXXIGETGSGKSTQLSQILH----RHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE 617 LP+ ++E +I G TG GK+TQ+ Q + ++ I VTQP E G G+ GY++RFE I + T GVLLR++ + + S +I+DE HER +NTD LL +V R V L +++I++ SAT+D ++F NCP + V G+ +PV+ Sbjct: 390 LPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGISHVIVDEIHERDINTDFLL-VVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQ 573 The following BLAST results are available for this feature:
BLAST of EY753754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753754 ID=EY753754; Name=EY753754; organism=Citrus sinensis; type=EST; length=863bpback to top |