EY720039

Overview
NameEY720039
Unique NameEY720039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.744e-15
Identity = 56/199 (28.14%), Postives = 89/199 (44.72%), Query Frame = 2
Query:  197 QPASATYHGPAPE-IPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINY--RFWPNNPPSYRAVNEEYAKYMREVVDKLF-----TYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVA 769
            +P+SA       E IP IDL +P    L   I +AS+ WG FQ+ NHGI   L+  ++++ K  F++P E K      +  K V GYG         KK W +     +   S  N+    WP++   Y  + +EY   M ++  +L      +              E +G       +++N+YP CP P+ A+G+ A
Sbjct:   35 RPSSAVSFDAVEESIPVIDLSNPDVTTL---IGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERK--LEAASSDKGVSGYGEPRISPFFEKKMWSEGF--TIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAA 226          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.142e-14
Identity = 59/209 (28.23%), Postives = 91/209 (43.54%), Query Frame = 2
Query:  164 IPAEFVRPEKEQPASATYHGPAPEIPTIDLD-DPVQDR-LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQE-EKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYR----AVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDDIEYML-KINYYPPCPRPDLALGVV 766
            +P  FV P K++      H   P I    +D DP++ + +V  + +AS +WG FQV NHGIP+ ++ +     ++FFE   E +K+ Y+R    K V      L K      SW D +F  + P           NPPS +       E    + ++V    FT                    D  ++    NYYPPCP+P+L +G +
Sbjct:   37 VPQIFVLPPKDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP-----------NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTI 234          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.948e-14
Identity = 60/211 (28.44%), Postives = 88/211 (41.71%), Query Frame = 2
Query:  164 IPAEFVRPEKEQPASATYHGPAPE-----IPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTY------XXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGV 763
            IP +F    K  P S  +  P PE     IP I L +P +  L+R   +A  EWG+F +T+HG+   L+  +    K  F LP   K +  R  D  +  GYG         K  W +                WP++   +  V EEY K M ++  +L +                   K  +G D I+  L++N YP CP P LA+G+
Sbjct:   19 IPLDFTNT-KTLPDSHVWSKPEPETTSGPIPVISLSNPEEHGLLR---QACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPD--ESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGL 223          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 60/202 (29.70%), Postives = 92/202 (45.54%), Query Frame = 2
Query:  161 TIPAEFV-RPEKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALG 760
            ++P  FV   +K  PA+         +P IDL    +D + RSI EA +E G FQV NHG+   ++  ++ + ++FF LP  +K  +YS      +    G     +  G+K W D L      P   +   WP+ P   R V E++    R+V  +L               +    G ++  +L IN+YP CP PD ALG
Sbjct:   13 SLPESFVFASDKVPPATKA----VVSLPIIDLSCG-RDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATY--DTGGEKYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNV--ILNINHYPSCPNPDKALG 205          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 2
Query:  161 TIPAEFVRP-EKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREV-VDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGV 763
            +IP  F+ P ++  PA+         +P ID+    +D + ++I ++ +E+G  QV NHGI   ++ ++ AV  EFF++P E+K E +S     ++    G+    E  G+K W+D +   ++P  S + + WP+ P   R V   Y    R V ++ L                + +GG     ++ INYYPP P P   LG+
Sbjct:   14 SIPDSFLLPADRLHPATTDV-----SLPIIDMSRG-RDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAF--ETLGEKYWID-VLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGG---RVVVDINYYPPSPNPSRTLGL 205          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12
Identity = 53/191 (27.75%), Postives = 82/191 (42.93%), Query Frame = 2
Query:  221 GPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYR---AVNEEYAKYMREVVDKL----FTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVA 769
            G    +P +D+ DP       ++A A+++WG F +  HG+P +L+ +++A     F LP  EK     RP D+    GYG+        K  W +          S   + WP     YR   AV EE+ + MR + DKL                    E    + +   + +N+YP CP P  ALG++A
Sbjct:   44 GGPDAVPVVDMRDPCA---AEAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDS---CGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIA 228          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.823e-12
Identity = 53/191 (27.75%), Postives = 81/191 (42.41%), Query Frame = 2
Query:  221 GPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYR---AVNEEYAKYMREVVDKL----FTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVA 769
            G    +P +D+ DP       ++  A+++WG F +  HG+P DL+ +++A     F LP  EK     RP D+    GYG+        K  W +          S   + WP     YR   AV EE+ + MR + DKL                    E    + +   + +N+YP CP P  ALG++A
Sbjct:   44 GEPDAVPVVDMRDPFA---AEAVGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDS---CGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIA 228          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.381e-12
Identity = 64/249 (25.70%), Postives = 105/249 (42.17%), Query Frame = 2
Query:  140 SLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDPVQDR-----LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSS------------INYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVATLIFPPSRSCAHES--SGLQSF 829
            S+ +    IP +F+ P+ E+P+         ++P IDL + + D        R I+EA ++ G F V NHGI  +LI         FF++P  EK+   R +   +  GY +        K  W + L  R     S            + + F P     +  V +EY + M  +  K+               +E    ++ + ++++NYYPPC +PDL LG       P S +  H+   +GLQ F
Sbjct:   32 SMLNLQANIPNQFIWPDDEKPSINVLE---LDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSG--ESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQP-----FGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFF--EENDSIMRLNYYPPCIKPDLTLG-TGPHCDPTSLTILHQDHVNGLQVF 267          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.381e-12
Identity = 60/219 (27.40%), Postives = 92/219 (42.01%), Query Frame = 2
Query:  137 ASLSHSNGTIPAEFVRPEKEQP---ASATYHGPAPEIPTIDLDDP-VQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKE-VYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWP--PSSINYRFWPNNPPSYRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALG 760
            A++      IP++F+ PE E P   A+   H P  +I  +   DP     + R + EA    G FQV NHGI ++L+         FF +P  EK+    RP ++    GY +        K  W + L  R  P  P+ +           +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG
Sbjct:    8 AAVLSGRADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGES---CGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPMETLG 220          
BLAST of EY720039 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.928e-12
Identity = 53/191 (27.75%), Postives = 81/191 (42.41%), Query Frame = 2
Query:  221 GPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYR---AVNEEYAKYMREVVDKL----FTYXXXXXXXXXXXXKEAAGGDDIEYMLKINYYPPCPRPDLALGVVA 769
            G    +P +D+ DP       ++A A+++WG F +  HG+P +L+  ++A     F LP  EK     RP D+    GYG+        K  W +          S   + WP     YR   AV EE+ + MR + DKL                    E    + +   + +N+YP CP P  ALG++A
Sbjct:   44 GGPDAVPVVDMRDPCA---AEAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDS---CGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIA 228          
The following BLAST results are available for this feature:
BLAST of EY720039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
G3OX4_ARATH8.744e-1528.14Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
ACCH3_SOLLC1.142e-1428.231-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3OX3_ARATH1.948e-1428.44Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
IDS3_HORVU2.544e-1429.702'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
IDS2_HORVU5.668e-1428.43Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3O22_WHEAT1.396e-1227.75Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
G3O23_WHEAT1.823e-1227.75Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
GAOX1_ARATH2.381e-1225.70Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
GAO1B_WHEAT2.381e-1227.40Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
G3O21_WHEAT6.928e-1227.75Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-B12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720039 ID=EY720039; Name=EY720039; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGCGTTACTGCGTCACAGTCGCAGGAAAGGCGCAAGCCAAG
AAAGAGAGAGGGAGAGAAGGAAAAGAAAAGTGGTGGGGTTTTGCTGGAAA
ATAAAATTAATGGAGGTGGAGAGGGTCCAAGCCATTGCTTCCTTATCCCA
TTCAAATGGCACAATTCCAGCAGAGTTCGTAAGACCCGAAAAAGAACAGC
CAGCAAGCGCAACGTACCACGGCCCCGCTCCTGAAATCCCCACGATCGAT
CTCGACGACCCCGTTCAAGACAGACTCGTACGTTCCATCGCGGAAGCCAG
CCGGGAGTGGGGGATTTTCCAGGTTACAAACCACGGGATACCTAGTGACC
TCATCGGTAAACTGCAAGCCGTCGGCAAAGAATTTTTTGAGCTCCCTCAG
GAAGAGAAAGAAGTGTATTCTCGTCCGGCTGATGCAAAAGACGTGCAAGG
ATACGGCACAAAGTTACAGAAAGAAGTCGAAGGAAAGAAATCTTGGGTTG
ATCATCTCTTCCACAGGGTTTGGCCTCCGTCTTCTATCAACTACCGCTTT
TGGCCCAACAACCCTCCTTCTTACCGAGCGGTGAATGAGGAGTATGCAAA
GTACATGAGGGAGGTGGTGGATAAGTTGTTTACGTATCTTTCGTTGGGAC
TGGGTGTCGAAGGAGGTGTTTTGAAAGAAGCAGCGGGAGGAGACGACATT
GAGTACATGCTCAAGATTAATTACTATCCGCCATGCCCACGTCCTGATCT
TGCTCTTGGAGTGGTGGCCACACTGATCTTTCCGCCCTCACGTTCTTGTG
CCCATGAAAGTTCTGGTCTGCAGTCTTTTAAGAGACCGTTGGATCGATGC
CAGTACAATCCGACGCTCTCATCATCACATCGGGGACAGATCGAGATCTG
AGCATGGCAGTAC
back to top