EY693113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.286e-27 Identity = 89/226 (39.38%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 GADRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I PE+L K G+ Q WF+ G I G +Y +P ++ ++ LMG E R G +G G + Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ADPV Sbjct: 50 GADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYR----VGGGPLGE----GLDPLYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPV 249
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.093e-27 Identity = 94/241 (39.00%), Postives = 126/241 (52.28%), Query Frame = 1 Query: 7 VRFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 +R V++A T + G DRP + S Q SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G + Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DHLADPV Sbjct: 37 MRRTVKSAPTS-IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR----VGGGPLGE----GLDPIYPGGAFDPL----------GLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.651e-27 Identity = 89/226 (39.38%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ DPV Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPV 250
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.687e-27 Identity = 81/207 (39.13%), Postives = 106/207 (51.21%), Query Frame = 1 Query: 70 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADP 687 W QS +YLDGSL GD GFDPL L+ DPE + +W +V+NGR+AMLG G + PE+L KAGL+ A W + G Y+A T + M+ + E RR+QD NPGS+ + F + Y + Y + K KE+ NGRLAMLA LG+ VQ V G GP++N HLADP Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIF--KSYSLPPHECGYPGRVFNPLNFAPLENKE------KELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADP 219
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26 Identity = 90/239 (37.66%), Postives = 124/239 (51.88%), Query Frame = 1 Query: 10 RFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 R V ++A + + GADRP + S ++ SYL+G GDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L K+G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G Y GGS DP D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DHLADPV Sbjct: 40 RTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET---FARNREL---EVIHARWAMLGALGCLTPELLAKSGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGE---VTDPIYPGGSFDPL----------GLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPV 253
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.482e-26 Identity = 89/226 (39.38%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ADPV Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 250
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26 Identity = 95/245 (38.78%), Postives = 125/245 (51.02%), Query Frame = 1 Query: 4 RVRFVVRAA--STPP-VKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 + RF +R S P + G DRP + S+Q SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G PE+L K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G + Y GG+ DP D S + K+KE+KNGRLAM ++ G+FVQ +VTG GP QN DH+ADPV Sbjct: 32 QARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCTFPELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR----VGGGPLGE----GLDPLYPGGAFDPL----------GLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPV 250
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 9.605e-26 Identity = 89/234 (38.03%), Postives = 122/234 (52.14%), Query Frame = 1 Query: 25 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 AAS+ GADR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ +++ LMG E R G +G Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DHLADPV Sbjct: 42 AASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG----GPLGEVVD---PLYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.254e-25 Identity = 90/242 (37.19%), Postives = 123/242 (50.83%), Query Frame = 1 Query: 4 RVRFVVRAASTPP--VKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADP 687 RV+ + + P + G+DRPL+ S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L K G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DHLADP Sbjct: 33 RVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG----GPLGE---VEDPIYPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADP 249
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.254e-25 Identity = 87/225 (38.67%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 GADR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ +++ LMG E R G +G Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DHLADPV Sbjct: 47 GADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG----GPLGEVVD---PLYPGGSFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 246 The following BLAST results are available for this feature:
BLAST of EY693113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693113 ID=EY693113; Name=EY693113; organism=Citrus sinensis; type=EST; length=841bpback to top |