EY693113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 4.965e-115 Identity = 200/240 (83.33%), Postives = 211/240 (87.92%), Query Frame = 1 Query: 4 RVRFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPVXHXGLTSXQFH 723 + FVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYF G EK LGGSGDPAY KDEKSMK+ KLKE+KNGRLAMLAILGYF+Q LVTGVGPYQN +DHLADPV + LTS +FH Sbjct: 34 KASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 2.306e-112 Identity = 196/237 (82.70%), Postives = 209/237 (88.19%), Query Frame = 1 Query: 16 VVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPVXHXGLTSXQFH 723 +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIAPE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYF G EK GGSG+PAY KDEKS+K+ KLKEVKNGRLAMLAILGYF+QGLVTGVGPYQN +DH+ADPV + LTS +FH Sbjct: 39 LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.694e-36 Identity = 94/239 (39.33%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 22 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLG----------------GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADP 687 R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE RR+ D PG + F K G GSG PA +K+ + KE+KNGRLAMLA++G + Q + TG GP N HLADP Sbjct: 52 RSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVL---NTPSWYT------AGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.024e-35 Identity = 93/239 (38.91%), Postives = 123/239 (51.46%), Query Frame = 1 Query: 22 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLG----------------GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADP 687 R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ L+G+AE RR+ D PG + F K G GSG PA +K+ + KE+KNGRLAMLA++G + Q + TG GP N HLADP Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTKIGIL---NTPSWY------TAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.807e-32 Identity = 89/222 (40.09%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 25 AASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADP 687 +A T K A + W S YL GSL GD GFDPLGL+ DPE KW E++NGR+AMLG G + PE+ K G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F ++Y G+ Y E K KE+ NGRLAMLA LG+ VQ VTG GP++N + HL+DP Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEVGYPGGIFNPLNFAPTQEA-----KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDP 241
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31 Identity = 84/215 (39.07%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 46 KQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADP 687 K A + W S YL GSLPGD GFDPLGL+ DPE +W E++NGR+AMLG G + PE+ G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F ++Y +G+ Y E K KE+ NGRLAMLA LG+ +Q VTG GP+ N + H++DP Sbjct: 48 KVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWYA------AGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPAGEVGYPGGIFNPLNFAPTLEA-----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.016e-28 Identity = 90/226 (39.82%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +++ LMGF E R G +G G +K Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ADPV Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDPL----------GLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.016e-28 Identity = 90/226 (39.82%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +++ LMGF E R G +G G +K Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ADPV Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDPL----------GLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27 Identity = 90/226 (39.82%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ADPV Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPV 250
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27 Identity = 90/226 (39.82%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N DH+ADPV Sbjct: 23 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPV 222 The following BLAST results are available for this feature:
BLAST of EY693113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693113 ID=EY693113; Name=EY693113; organism=Citrus sinensis; type=EST; length=841bpback to top |