EY693113

Overview
NameEY693113
Unique NameEY693113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25
Identity = 90/234 (38.46%), Postives = 122/234 (52.14%), Query Frame = 1
Query:   25 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            +AST P   G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP              +D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   52 SASTSPW-YGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPEN---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG----GPLGE---VTDPIYPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.767e-25
Identity = 87/225 (38.67%), Postives = 116/225 (51.56%), Query Frame = 1
Query:   52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+GR+AMLGA+G + PE+L + G+   E    WF+ G  I   G   Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   50 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHGRWAMLGALGCVFPELLARNGVKFGEAV--WFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVVD---PLYPGGSFDPL----------GLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 249          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25
Identity = 88/237 (37.13%), Postives = 122/237 (51.48%), Query Frame = 1
Query:   16 VVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            V ++A +     G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP              +D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   39 VAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVVD---PLYPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25
Identity = 87/225 (38.67%), Postives = 117/225 (52.00%), Query Frame = 1
Query:   52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            G+DR  +    S +S SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R    A  G +G         Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   52 GSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGNGPLGEAEDL---LYPGGSFDPL----------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 252          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25
Identity = 90/241 (37.34%), Postives = 126/241 (52.28%), Query Frame = 1
Query:    7 VRFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYL-GGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            +R  VR+A    +  G DRP +    S+ + SYL G  PGDYG+D   +S DPE    F + + L   EVI+ R+AMLGA+G + PE+L K GL   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G++G     G +  L GG+ DP               D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   38 MRRTVRSAPES-IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGE----GLDPLLPGGAFDPL----------GLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25
Identity = 87/225 (38.67%), Postives = 117/225 (52.00%), Query Frame = 1
Query:   52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            G+DR  +    S +S SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R    A  G +G         Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   52 GSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGNGPLGEAEDL---LYPGGSFDPL----------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 252          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.131e-25
Identity = 89/234 (38.03%), Postives = 120/234 (51.28%), Query Frame = 1
Query:   25 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            AAS+     G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GG+ DP               D ++  D K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   42 AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG----GPLGEVVD---PLYPGGTFDPL----------GLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 89/239 (37.24%), Postives = 122/239 (51.05%), Query Frame = 1
Query:   25 AASTPPVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            A+   PV  G+     DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP              +D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   38 ASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVVD---PLYPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.811e-24
Identity = 88/235 (37.45%), Postives = 120/235 (51.06%), Query Frame = 1
Query:   22 RAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            + AS+     G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   43 KPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVVD---PLYPGGSFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY693113 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.811e-24
Identity = 86/225 (38.22%), Postives = 117/225 (52.00%), Query Frame = 1
Query:   52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFFGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNPMDHLADPV 690
            G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP              +D ++  + K+KE+KNGRLAM ++ G+FVQ +VTG GP +N  DHLADPV
Sbjct:   53 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVVD---PLYPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
The following BLAST results are available for this feature:
BLAST of EY693113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CB2B_PINSY2.140e-2538.46Chlorophyll a-b binding protein type 2 member 1B, ... [more]
CB22_HORVU4.767e-2538.67Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB2B_SOLLC6.226e-2537.13Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB22_ARATH6.226e-2538.67Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_PINTH6.226e-2537.34Chlorophyll a-b binding protein type I, chloroplas... [more]
CB21_ARATH6.226e-2538.67Chlorophyll a-b binding protein 165/180, chloropla... [more]
CB29_MAIZE8.131e-2538.03Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB21_TOBAC1.387e-2437.24Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2G_SOLLC1.811e-2437.45Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB24_TOBAC1.811e-2438.22Chlorophyll a-b binding protein 40, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-H10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693113 ID=EY693113; Name=EY693113; organism=Citrus sinensis; type=EST; length=841bp
CCACGCGTCCGCTTTGTTGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCA
AGGAGCAGACAGACCGTTGTGGTTTGCATCCAAACAAAGCCTTTCATACT
TGGATGGCAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTCTCTCA
GACCCTGAAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCCTACGG
CGAGGTCATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGCCATTG
CACCGGAGATTCTTGGCAAGGCAGGCCTCATTCCGCAAGAAACTGCCCTG
GCCTGGTTCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAACTACTG
GGCAGACCCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGGATTTG
CCGAGCACCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGGGCAGG
CAATACTTCTTCGGATTCGAGAAATACTTGGGAGGATCCGGCGATCCGGC
TTACCCTGGAGGACCTCTATTCAACCCTCTGGGTCTTGGGAAAGATGAGA
AGTCAATGAAGGATTTCAAGCTCAAGGAAGTGAAGAATGGAAGATTGGCA
ATGTTGGCAATCTTGGGTTACTTTGTTCAAGGTCTTGTTACAGGAGTTGG
GCCTTACCAGAACCCTATGGATCACTTGGCTGATCCTGTAAANCACNATG
GTTTGACTAGCCNTCAGTTTCACTGAGAGAGAAAATTCTTGNTCATTGCT
TGGAATATATATTCCAAGCCTTGTCATCCCCACTCTGNTCTATTCTACTT
TCCCCATGTAAAATATCTATGTGAAAAGTGATGTAACTTGG
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