EY692468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RM02_ARATH (60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana GN=RPL2 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.323e-46 Identity = 99/128 (77.34%), Postives = 106/128 (82.81%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGVQMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPGLMA 635 RALRQFTL GKSAGRNSSGRIT+FHRGGGSKRL RRIDLKR+TSS+GIVE +EYDPNRSS IAPVRWI+G QKK NTIE+F PP RK EPTT ISG FSFSFL VD+RKVA FSPGLMA Sbjct: 7 RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRSSQIAPVRWIKG--GCQKKMNTIEKFAPP--RKILEPTTNTISGLFSFSFLPGKVDKRKVACFSPGLMA 130
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 9.652e-38 Identity = 90/130 (69.23%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGV-QMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPGLMAG 638 RALR FTL GKSAGRNSSGRIT+FHRGGGSKRLQR+IDLKR+TSSIGIVER+EYDPNRSS IA VRWIEGV +Q+K TIEEF P RK E TTA I FSFS LS + Q + AS S G G Sbjct: 8 RALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIEYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALP--RKILESTTATIFCLFSFSSLSSPLAQGETASLSFGSSLG 135
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 9.652e-38 Identity = 90/130 (69.23%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGV-QMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPGLMAG 638 RALR FTL GKSAGRNSSGRIT+FHRGGGSKRLQR+IDLKR+TSSIGIVER+EYDPNRSS IA VRWIEGV +Q+K TIEEF P RK E TTA I FSFS LS + Q + AS S G G Sbjct: 8 RALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIEYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALP--RKILESTTATIFCLFSFSSLSSPLAQGETASLSFGSSLG 135
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.652e-38 Identity = 90/130 (69.23%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGV-QMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPGLMAG 638 RALR FTL GKSAGRNSSGRIT+FHRGGGSKRLQR+IDLKR+TSSIGIVER+EYDPNRSS IA VRWIEGV +Q+K TIEEF P RK E TTA I FSFS LS + Q + AS S G G Sbjct: 8 RALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIEYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALP--RKILESTTATIFCLFSFSSLSSPLAQGETASLSFGSSLG 135
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.969e-26 Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 3 Query: 252 RALRQFTLG-KGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGVQMQQKK 485 +AL+Q T K SAGRNSSGRIT+FHRGGGSKRLQR+ID KR+TSS+GIVER+EYDPNRSSWIA VRWIEGV K+ Sbjct: 9 KALKQLTFHLKRNSAGRNSSGRITVFHRGGGSKRLQRKIDFKRSTSSMGIVERIEYDPNRSSWIALVRWIEGVLRPGKR 87
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RICFE (50S ribosomal protein L2 OS=Rickettsia felis GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RICCN (50S ribosomal protein L2 OS=Rickettsia conorii GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RICAE (50S ribosomal protein L2 OS=Rickettsia africae (strain ESF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of EY692468 vs. ExPASy Swiss-Prot
Match: RL2_RICTY (50S ribosomal protein L2 OS=Rickettsia typhi GN=rplB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 252 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 464 R L+ T G K+ GRN GRIT +HRGGG K+L R ID KR I +VER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGMSKTGGRNQQGRITSWHRGGGHKKLYRVIDFKRKKIDIFAVVERIEYDPNRTAFIALIKYDDG 99 The following BLAST results are available for this feature:
BLAST of EY692468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692468 ID=EY692468; Name=EY692468; organism=Citrus sinensis; type=EST; length=918bpback to top |