EY688646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.284e-48 Identity = 84/109 (77.06%), Postives = 96/109 (88.07%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKS-GPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTT+DRDYG NNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPV GKYYREP KS P+P HLI +++S DHFVSDTG++VYY+TD ++ Sbjct: 338 KLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPKKSAAPLPFHLIGEIIRSFKTDHFVSDTGDVVYYQTDSKI 446
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.631e-20 Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 6 LPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYR 203 LP Y EW++LRG L TVDRDYGI N + H+I THV HHLF +PHYH +EATKA KP+LG+YYR Sbjct: 279 LPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYR 345
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.963e-19 Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 6 LPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYR 203 LP Y EW++LRG L TVDRDYGI N + H+I THV HHLF +PHYH +E TKA KP+LG YY+ Sbjct: 280 LPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQ 346
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.106e-18 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 6 LPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYR 203 LP Y EW++LRG L TVDRDYGI N + H+I THV HHLF +PHY+ +EATKA KP+LG YY+ Sbjct: 279 LPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQ 345
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.886e-18 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 6 LPWYRGKEWNYLRGGLTTVDRDYGIFNNI-HHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYR 203 LP Y EW++L+G L T+DRDYGI N + HH THV HHLF +PHYH +EAT A KP+LG+YY+ Sbjct: 283 LPHYDSSEWDWLKGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYQ 349
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.765e-16 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 6 LPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYR 203 LP Y EWN+LRG L+T+DRD+G N++ HD+ THV+HHLF IPHYH EA A VLG +Y+ Sbjct: 272 LPHYDSSEWNWLRGALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHYHAKEARDAINTVLGDFYK 338
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.951e-15 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIF--NNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYE 311 KLP YR WN+ RG L TVDR +G F + H + THV HHLF Q+P YH EAT K +LG+YY P ++ + +S E FV D G++V+++ Sbjct: 301 KLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYD------PSPIVVAVWRSFRECRFVEDHGDVVFFK 399
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.951e-15 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIF--NNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYE 311 KLP YR WN+ RG L TVDR +G F + H + THV HHLF Q+P YH EAT K +LG+YY P ++ + +S E FV D G++V+++ Sbjct: 301 KLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYD------PSPIVVAVWRSFRECRFVEDHGDVVFFK 399 The following BLAST results are available for this feature:
BLAST of EY688646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY688646 ID=EY688646; Name=EY688646; organism=Citrus sinensis; type=EST; length=486bpback to top |