EY688646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.382e-53 Identity = 90/108 (83.33%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTTVDRDYG+FNNIHHDIGTHVIHHLFPQIPHYHL EATKAAKPVLGKYYREP KSGPIP HL+K+L +S+ +DH+VSD+GEIV+Y+TDP + Sbjct: 264 KLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVSDSGEIVFYQTDPHI 371
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 8.960e-53 Identity = 90/108 (83.33%), Postives = 100/108 (92.59%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTT+DRDYG+ NNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPVLGKYYREP+KSGP+P+HL+ L KSI EDHFVSD G++VYYE DP L Sbjct: 288 KLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSDEGDVVYYEADPNL 395
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.170e-52 Identity = 91/115 (79.13%), Postives = 104/115 (90.43%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQLKKFLATK 347 KLPWYRG+EW+YLRGGLTTVDRDYG NN+HHDIGTHVIHHLFPQIPHYHLVEATK+AK VLGKYYREP KSGP+P HL+K L++SI +DHFVSDTG+IVYY+TDP+L + TK Sbjct: 264 KLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYREPQKSGPLPFHLLKYLLQSISQDHFVSDTGDIVYYQTDPKLHQDSWTK 378
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.170e-52 Identity = 89/108 (82.41%), Postives = 101/108 (93.52%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTT+DRDYG+ NNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPVLGKYYREP+KSGP+P+HL++ L KSI EDH+VSD GE+VYY+ DP L Sbjct: 330 KLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNL 437
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.528e-52 Identity = 90/115 (78.26%), Postives = 104/115 (90.43%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQLKKFLATK 347 KLPWYRGKEW+YLRGGLTT+DRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLV+ATKAAK VLG+YYREP SG IP+HL+++LV SI +DH+VSDTG+IV+YETDP L + + K Sbjct: 268 KLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDLYVYASDK 382
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.996e-52 Identity = 88/108 (81.48%), Postives = 101/108 (93.52%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTT+DRDYG NNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPVLGKYYREP SGP+P+HL+ +L+KS+ +DHFVSDTG++VYYE DP+L Sbjct: 323 KLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKL 430
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 3.405e-52 Identity = 89/115 (77.39%), Postives = 104/115 (90.43%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQLKKFLATK 347 KLPWYRGKEW+YLRGGLTT+DRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLV+AT+AAK VLG+YYREP SG IP+HL+++LV SI +DH+VSDTG+IV+YETDP L + + K Sbjct: 265 KLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDLYVYASDK 379
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.690e-51 Identity = 88/117 (75.21%), Postives = 103/117 (88.03%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQLKKFLATKFE 353 KLPWYRGK W+YLRGGLTT+DRDYG NNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPV+GKYYREP KSGP+P+HL+ +LV+S+ EDH+VSDTG++VYY+ DP+L K E Sbjct: 344 KLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLHLLGSLVRSMKEDHYVSDTGDVVYYQKDPKLSGIGGEKTE 460
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 6.422e-51 Identity = 85/108 (78.70%), Postives = 98/108 (90.74%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTT+DRDYG NNIHHDIGTHVIHHLFPQIPHYHL+EAT+AAKPVLGKYYREP KS P+P HL+ +L +S+ DH+VSD G++VYY+TDPQL Sbjct: 334 KLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSAPLPFHLLGDLTRSLKRDHYVSDVGDVVYYQTDPQL 441
BLAST of EY688646 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.211e-49 Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 3 Query: 3 KLPWYRGKEWNYLRGGLTTVDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPNKSGPIPVHLIKNLVKSIGEDHFVSDTGEIVYYETDPQL 326 KLPWYRGKEW+YLRGGLTTVDRDYG NIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPVLG YYREP +S P+P HLIK L++S+ +DHFVSDTG++VYY+TD L Sbjct: 267 KLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTDSLL 374 The following BLAST results are available for this feature:
BLAST of EY688646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688646 ID=EY688646; Name=EY688646; organism=Citrus sinensis; type=EST; length=486bpback to top |