EY684977

Overview
NameEY684977
Unique NameEY684977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP1_SPIOL (Acyl carrier protein 1, chloroplastic OS=Spinacia oleracea GN=ACL1.1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 2
Query:   92 SVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            S T T     S S   K +QG               SFP+LR  ++ R     AAK ET+DKVC IVK++LAL AD  VT +S+F+ LGADSLDTV
Sbjct:    5 SATTTVRVQPSSSSLHKLSQGNGRCSSIVCLDWGKSSFPTLR--TSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTV 98          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP3_ARATH (Acyl carrier protein 3, chloroplastic OS=Arabidopsis thaliana GN=ACL1.3 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 2
Query:  209 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            S  +R  P R  V CAAKPETVDKVC +V+KQL+L     +T  +KFAALGADSLDTV
Sbjct:   38 SFNLRQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTV 95          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP2_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 2
Query:  209 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            +LR     R  VSCAAKPETV+KV +IVKKQL+L  D  V  E+KFA LGADSLDTV
Sbjct:   38 NLRRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTV 94          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP1_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 2
Query:  221 RSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            RS P R  VSCAAKPETV+KV +IVKKQL+L  D  V  E+KFA LGADSLDTV
Sbjct:   41 RSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQNVVAETKFADLGADSLDTV 94          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP3_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 2
Query:  209 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            +LR     R  VSCAAKPET++KV +IVKKQL+L  D  V  E+KFA LGADSLDTV
Sbjct:   38 NLRRSIPTRLSVSCAAKPETIEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTV 94          
The following BLAST results are available for this feature:
BLAST of EY684977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACP1_SPIOL1.930e-1145.83Acyl carrier protein 1, chloroplastic OS=Spinacia ... [more]
ACP3_ARATH2.521e-1162.07Acyl carrier protein 3, chloroplastic OS=Arabidops... [more]
ACP2_BRANA2.521e-1164.91Acyl carrier protein, chloroplastic OS=Brassica na... [more]
ACP1_BRANA2.521e-1170.37Acyl carrier protein, chloroplastic OS=Brassica na... [more]
ACP3_BRANA3.292e-1163.16Acyl carrier protein, chloroplastic OS=Brassica na... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684977 ID=EY684977; Name=EY684977; organism=Citrus sinensis; type=EST; length=889bp
CGCAGTCTTCGTGCTCTTCGTCGTCCTCTCTCTCGCTCTCTCTCGCTCTC
TCTCTTTTGAACTTCAAATCTCAGATCTCTATTCAATGGCTTCAGTTACA
GGAACTTCAGCCTGCATGACCTCTCTGTCTTGCTCTTTCAAGCAGACCCA
GGGTAGGATCTCTAGTGTGAATTCAGTTTCACTTTCCATCAATGGGAAAA
GCTTCCCATCCCTTAGAATGCGATCAGCACCCCGCTTCCGGGTTTCCTGT
GCGGCCAAGCCTGAGACTGTGGATAAGGTTTGTCAAATTGTGAAGAAGCA
GTTGGCACTCCCAGCAGATACTACCGTTACCGGGGAGTCAAAATTCGCTG
CCCTTGGAGCTGATTCTCTTGATACGGTACTTCAATATCAACCTTATATA
TGTTCCGTTAACTGTCCATCATGTTTATGCTAAATTTTTATTTTTCTATT
TGTCCGTAATGGTTTGTTTTTATTTTTCTGATGTTGACATTCCATATTGT
TATGGTGTTAGATGTTGTCTTTTTGTTCAAAGTGCTGATGTTGGAATGTG
TATAATGTAATTAAAAAGATTGGAAAATGATTTCTCGTTTTCATGTTGCA
TGAGCATCTGTTTCTCCCTGTAGTTTAAGAATTGCCGGGTGGCTCTGTAG
ACCTAATCGGAAGATTGAGGACACACGCTGAACAATAGCACGGCCAAAAG
AATGATTGGACGGTAACAACAGACGGAGCGGACCCTGGGGCTCACAGGAA
ACAAAATGGAAAGGAAACCGAAGAGGAATCTAAACACGAGCACAAAAAGA
AGGAGACCCACACAGACCGGCCGCGACACACACAACAGCGGACATCGGCC
AAGCACAAACAAAAGAGCCGCACGCCAAAGCACGACCAC
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