EY684977

Overview
NameEY684977
Unique NameEY684977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.174e-22
Identity = 63/98 (64.29%), Postives = 66/98 (67.35%), Query Frame = 2
Query:   86 MASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            MASVTGTS  M S   S   +  R            GKSF  LRMRSA RF V CAAKPETV+KVC IVKKQLALP D+ VTGESKFA LGADSLDTV
Sbjct:    1 MASVTGTSISMASFKASLAPS--RVSNLRSVSLPIKGKSFAPLRMRSA-RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTV 95          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.248e-18
Identity = 54/97 (55.67%), Postives = 60/97 (61.86%), Query Frame = 2
Query:   89 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            ++  G S C+ S SCS     GR             KSFPSLR       RVSC AKPETV KVC+IVKKQLALP D+ V G SKF+ALGADSLDTV
Sbjct:    3 SAAAGASICIKSASCS-PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTV 98          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 51/100 (51.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:   89 ASVTGTSACMTSLSCSFKQTQ--GRXXXXXXXXXXXXGKSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            A+   +  C+ S SCS  + Q                GK FPSLR    P  FRV C AK ETV +VC+IVKKQLALP D+ V G SKF+ALGADSLDTV
Sbjct:    4 AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTV 103          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 53/98 (54.08%), Postives = 61/98 (62.24%), Query Frame = 2
Query:   89 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRM-RSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            ++  G S C+ S S S     GR             KSFPSL+  +S+   RVSC AKPETV KVC IVKKQLALP D+ V G SKF+ALGADSLDTV
Sbjct:    3 SAAAGASICIKSASFS-PLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTV 99          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 50/97 (51.55%), Postives = 59/97 (60.82%), Query Frame = 2
Query:   89 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            ++   +S C+ S SCS     GR             KSF S   R +   RV+C AKPETV KVC IVKKQLALP D+ V+G SKF+ALGADSLDTV
Sbjct:    3 SAAPASSICIKSASCS-ALAPGRISSLRSVSLPVSRKSFFS--RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTV 96          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP2_HORVU (Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 2
Query:  209 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            S R++  P RF V CAAK ETV+KVC IVK QLAL  DT V+G S FA LGADSLDTV
Sbjct:   34 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSTFADLGADSLDTV 91          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP2_ARATH (Acyl carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=ACL1.2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 2
Query:  197 KSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            +S  S  +R  P R  VSCAAKPETVDKVC +V+KQL+L     +T  +KFAALGADSLDTV
Sbjct:   34 RSSLSFNLRQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTV 95          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP1_HORVU (Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 2
Query:  200 SFPSLRMR-SAPRFRVSCAA------KPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            SF S+  R S+ RF++ CAA      K ETVDKVC IVKKQLA+P  T VT ESKF+ LGADSLDTV
Sbjct:   42 SFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKFSELGADSLDTV 108          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP_BRACM (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris GN=Acl1.1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2
Query:  209 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            +LR     RF +SCAAKPETV+KV +IVKKQL+L  D  V  E+KFA LGADSLDTV
Sbjct:   38 NLRRSIPTRFSISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTV 94          
BLAST of EY684977 vs. ExPASy Swiss-Prot
Match: ACP3_HORVU (Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 2
Query:  212 LRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTV 379
            LR++  P RF V C+AK +TV+KVC+IVKKQLA+P  T V G +KF+ LGADSLDTV
Sbjct:   35 LRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVCGTTKFSDLGADSLDTV 91          
The following BLAST results are available for this feature:
BLAST of EY684977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACP1_CASGL3.174e-2264.29Acyl carrier protein 1, chloroplastic OS=Casuarina... [more]
ACP4_CUPLA1.248e-1855.67Acyl carrier protein 4, chloroplastic OS=Cuphea la... [more]
ACP3_CUPLA2.603e-1651.00Acyl carrier protein 3, chloroplastic OS=Cuphea la... [more]
ACP1_CUPLA2.603e-1654.08Acyl carrier protein 1, chloroplastic OS=Cuphea la... [more]
ACP2_CUPLA6.410e-1551.55Acyl carrier protein 2, chloroplastic OS=Cuphea la... [more]
ACP2_HORVU3.889e-1267.24Acyl carrier protein 2, chloroplastic OS=Hordeum v... [more]
ACP2_ARATH3.889e-1261.29Acyl carrier protein 2, chloroplastic OS=Arabidops... [more]
ACP1_HORVU3.889e-1262.69Acyl carrier protein 1, chloroplastic OS=Hordeum v... [more]
ACP_BRACM6.634e-1264.91Acyl carrier protein SF2, chloroplastic OS=Brassic... [more]
ACP3_HORVU8.664e-1263.16Acyl carrier protein 3, chloroplastic OS=Hordeum v... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-007-B03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684977 ID=EY684977; Name=EY684977; organism=Citrus sinensis; type=EST; length=889bp
CGCAGTCTTCGTGCTCTTCGTCGTCCTCTCTCTCGCTCTCTCTCGCTCTC
TCTCTTTTGAACTTCAAATCTCAGATCTCTATTCAATGGCTTCAGTTACA
GGAACTTCAGCCTGCATGACCTCTCTGTCTTGCTCTTTCAAGCAGACCCA
GGGTAGGATCTCTAGTGTGAATTCAGTTTCACTTTCCATCAATGGGAAAA
GCTTCCCATCCCTTAGAATGCGATCAGCACCCCGCTTCCGGGTTTCCTGT
GCGGCCAAGCCTGAGACTGTGGATAAGGTTTGTCAAATTGTGAAGAAGCA
GTTGGCACTCCCAGCAGATACTACCGTTACCGGGGAGTCAAAATTCGCTG
CCCTTGGAGCTGATTCTCTTGATACGGTACTTCAATATCAACCTTATATA
TGTTCCGTTAACTGTCCATCATGTTTATGCTAAATTTTTATTTTTCTATT
TGTCCGTAATGGTTTGTTTTTATTTTTCTGATGTTGACATTCCATATTGT
TATGGTGTTAGATGTTGTCTTTTTGTTCAAAGTGCTGATGTTGGAATGTG
TATAATGTAATTAAAAAGATTGGAAAATGATTTCTCGTTTTCATGTTGCA
TGAGCATCTGTTTCTCCCTGTAGTTTAAGAATTGCCGGGTGGCTCTGTAG
ACCTAATCGGAAGATTGAGGACACACGCTGAACAATAGCACGGCCAAAAG
AATGATTGGACGGTAACAACAGACGGAGCGGACCCTGGGGCTCACAGGAA
ACAAAATGGAAAGGAAACCGAAGAGGAATCTAAACACGAGCACAAAAAGA
AGGAGACCCACACAGACCGGCCGCGACACACACAACAGCGGACATCGGCC
AAGCACAAACAAAAGAGCCGCACGCCAAAGCACGACCAC
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