EY744219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MANSM (50S ribosomal protein L13 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplM PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.617e-24 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEH 602 W V DA G+ LGRLA+++A+ ++GK K Y P+ D GD IV+NA + VTGRK +KVYYWHTGY+G +K+ T KE + R P I AV MLP+ ++ GS+H Sbjct: 15 WYVVDATGKTLGRLATELASRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKVYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGSQH 130
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_TRIEI (50S ribosomal protein L13 OS=Trichodesmium erythraeum (strain IMS101) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 237 NLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 ++EG +W V DA+GQ LGRLA+ +A +++GK+KPTY P+ D GD IV+NA+ + VTG+K K+Y H+G G +K + R P I +AV MLP+N ++PGS HP Sbjct: 10 DIEGKKWYVIDAEGQRLGRLATAIAMIIRGKNKPTYTPHMDTGDFVIVVNAEKVTVTGKKSSQKLYRRHSGRPGGMKTEVFSKLQARLPQRIIEEAVFGMLPKNSLGRKLHNKLKVYPGSNHP 132
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_OLICO (50S ribosomal protein L13 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 58/132 (43.94%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*TIRDAS 644 +W + DAKG V+GRLA+ VA ++GK PTY P+ D GD IV+NA + +TGRK NK+YY HTG+IG +KER+ K +E R P + KA+ RM+PR ++ G+EHP P + AS Sbjct: 14 KWVIIDAKGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIVINAAQVVLTGRKRDNKMYYNHTGFIGGIKERSAKSILEGRFPERVLEKAIERMIPRGPLGRIQMGNLRVYAGAEHPHEAQNPEVVDIAS 145
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCTU (50S ribosomal protein L13 OS=Mycobacterium tuberculosis GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++G KL++K+ Y H+GY G L +RT+ E M+R P + KA+L MLP+N ++ G EHP Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCTA (50S ribosomal protein L13 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++G KL++K+ Y H+GY G L +RT+ E M+R P + KA+L MLP+N ++ G EHP Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCBT (50S ribosomal protein L13 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++G KL++K+ Y H+GY G L +RT+ E M+R P + KA+L MLP+N ++ G EHP Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCBP (50S ribosomal protein L13 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++G KL++K+ Y H+GY G L +RT+ E M+R P + KA+L MLP+N ++ G EHP Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MYCBO (50S ribosomal protein L13 OS=Mycobacterium bovis GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 255 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHP 605 W V DA VLGRLA A +++GK KPT+APN D GD IV+NA + ++G KL++K+ Y H+GY G L +RT+ E M+R P + KA+L MLP+N ++ G EHP Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHP 131
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_MICLC (50S ribosomal protein L13 OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP*T 629 +W + DA VLGRLAS AT+++GK KPT+AP+ D GD I++NA+ + +TG KL+ K Y H+GY G LK ++ E +E +P A+ KAV MLP+N ++ G+EHP P T Sbjct: 14 QWHIIDATDVVLGRLASHTATLLRGKHKPTFAPHMDMGDYVIIVNAEKVALTGAKLEKKRAYRHSGYPGGLKSQSYAELLETNPVRAVEKAVKGMLPKNSLAAQQLSKLKVYKGAEHPHTAQQPQT 139
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACHK (50S ribosomal protein L13 OS=Bacillus thuringiensis subsp. konkukian GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24 Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP P Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138 The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bpback to top |