EY744219

Overview
NameEY744219
Unique NameEY744219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744219_ssr47 microsatellite EY744219_ssr47:47..58. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACCR (50S ribosomal protein L13 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACCQ (50S ribosomal protein L13 OS=Bacillus cereus (strain Q1) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACC7 (50S ribosomal protein L13 OS=Bacillus cereus (strain AH187) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACC4 (50S ribosomal protein L13 OS=Bacillus cereus (strain B4264) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACC3 (50S ribosomal protein L13 OS=Bacillus cereus (strain 03BB102) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACC1 (50S ribosomal protein L13 OS=Bacillus cereus (strain ATCC 10987) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACC0 (50S ribosomal protein L13 OS=Bacillus cereus (strain AH820) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACAN (50S ribosomal protein L13 OS=Bacillus anthracis GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACAH (50S ribosomal protein L13 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
[Close]
BLAST of EY744219 vs. ExPASy Swiss-Prot
Match: RL13_BACAC (50S ribosomal protein L13 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplM PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 3 
Query:  252 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFWRPAP 623
            +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD  I++NA+ I +TG KL +K+YY HT + G LK+RT  E     P + +  A+  MLP+            ++ G+EHP     P
Sbjct:   15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKP 138
The following BLAST results are available for this feature:
BLAST of EY744219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL13_BACCR8.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACCQ8.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACC78.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACC48.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACC38.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACC18.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACC08.643e-2441.9450S ribosomal protein L13 OS=Bacillus cereus (stra... [more]
RL13_BACAN8.643e-2441.9450S ribosomal protein L13 OS=Bacillus anthracis GN... [more]
RL13_BACAH8.643e-2441.9450S ribosomal protein L13 OS=Bacillus thuringiensi... [more]
RL13_BACAC8.643e-2441.9450S ribosomal protein L13 OS=Bacillus anthracis (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744219 ID=EY744219; Name=EY744219; organism=Citrus sinensis; type=EST; length=820bp
ATAAACCATACTCTTAGGGTTTACGCAGGGCCATCTCTAACTTTTGTTAT
TATTATTATTTGAATGTCCTTTACTTTTGATTTTGGGTTGTAATTTGAAT
ATAGCTCTGAATTTGATTTGCGTTACTCATTTTTGTTTAAAAGAAGTTAT
AACAGAGCAATAGAAAAATGGCAAACCAAGCAGCCACAGCTTTCAGTGGC
AACATGAAGAAAGCGCTTGCTGGGCTGAGGCGAATCAATCTAGAAGGTCT
ACGATGGAGAGTTTTTGATGCTAAAGGCCAGGTCCTTGGGAGATTAGCAT
CTCAGGTAGCTACTGTCGTTCAAGGCAAGGATAAGCCTACGTACGCTCCT
AATCGTGATGATGGTGATATGTGCATTGTGCTTAATGCAAAAGATATATG
TGTTACTGGGAGGAAACTTAAAAATAAGGTTTACTACTGGCATACCGGGT
ATATAGGCCACCTCAAGGAAAGGACCTTAAAAGAACAGATGGAGAGGGAC
CCTACAGAAGCCATTCGTAAAGCTGTCTTACGCATGCTTCCAAGAAATAA
ATTACGTGATGATAGAGATCGAAAACTGAGGATTTTTCCTGGAAGCGAGC
ACCCTTTTTGGCGACCGGCCCCCTGAACCATACGTGATGCCTCCTCGACG
TGGTAGAGAACTGCGACCTCGGGTTAGAAGAGCCATGATTAAAAGAACAA
AAAAAGGCGGAAAAGCAGCCAAATAACCAGGGATTGAGGAAAAACAAAAA
GAAAAAATTTGAAAACAAAATGGCTGGCCTGAAAATTTTGGTGGGGGCCC
CTTTTGGTTTTGAAAAGGGA
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