EY661026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.597e-64 Identity = 139/257 (54.09%), Postives = 165/257 (64.20%), Query Frame = 2 Query: 101 LRATPFLGQSRTTANALKDVVPMGNAKYTMGNEL----------WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 L + F G++ + A +V +G+ + TM + WYG DRVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G +GE LY F +E+KNGRLAMFSM FF AIVTGKGP E + W +AT Sbjct: 8 LSSPAFAGKAVKLSPAASEV--LGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFAT 261
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.597e-64 Identity = 141/245 (57.55%), Postives = 157/245 (64.08%), Query Frame = 2 Query: 107 ATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 A+ G R T K V P G + WYG DRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G +GE LY F +EIKNGRLAMFSM FF AIVTGKGP E + W +AT Sbjct: 24 ASEVFGTGRVTMR--KTVKPTGPS-----GSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 6.004e-64 Identity = 135/221 (61.09%), Postives = 147/221 (66.52%), Query Frame = 2 Query: 176 AKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGTTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 AK WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTA LSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+ G P LY F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYAT 261
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 6.004e-64 Identity = 139/257 (54.09%), Postives = 163/257 (63.42%), Query Frame = 2 Query: 101 LRATPFLGQSRTTANALKDVVPMGNAKYTM-----------GNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGTTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 L ++ F G++ + + ++ GN K TM + WYGP+RVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFK G+QIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+ G P LY F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 8 LSSSSFAGKAVKLSPSSSEIT--GNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 261
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 6.004e-64 Identity = 140/245 (57.14%), Postives = 157/245 (64.08%), Query Frame = 2 Query: 107 ATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGT-TLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 +TP LG R + +K WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E WFKAG+QIFSEGGLDYLGN +L+HAQSILA+ QV+LMG VEG+RI G P +GE T +Y F +EIKNGRLAMFSM FF AIVTGKGP E E W YAT Sbjct: 4 STPQLGVGRVSMRKTA-------SKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYAT 239
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.841e-64 Identity = 132/213 (61.97%), Postives = 148/213 (69.48%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGT-TLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 WYGPDRV YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLG+P L+HAQSILA+ QV+LMG +EG+R+ G P +GE T +Y F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 62 WYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP-LGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYAT 272
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.841e-64 Identity = 134/221 (60.63%), Postives = 147/221 (66.52%), Query Frame = 2 Query: 176 AKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGTTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 AK WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+ + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+ G P LY F +EIKNGRLAMFSM FF AIVTGKGP E + W +AT Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.841e-64 Identity = 137/249 (55.02%), Postives = 154/249 (61.85%), Query Frame = 2 Query: 116 FLGQSRTTANALKDVVPMGNAKYTM--------GNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGTTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 F GQ N L V G A+ M +WYG DR YLGPFS PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+TPE+L K V F E VWFKAG+QIF+EGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G P +Y F +E+KNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 12 FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYAT 259
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.024e-63 Identity = 126/194 (64.95%), Postives = 142/194 (73.20%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE 781 WYGPDR K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPE F + R LEVIH RWA+LGALG +TPE+L + V F EPVWFKAGAQIFSEGGLDYLG+P L+HAQ+I+A L QVVLMGL+EG+R+NG P GEG LY F +EIKNGRLAMFS FF AIVTGKGP + Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGP-AGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQ 231
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.024e-63 Identity = 132/213 (61.97%), Postives = 148/213 (69.48%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGT-TLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 WYGPDRV YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAGAQIFSEGGLDYLG+P L+HAQSILA+ QV+LMG +EG+R+ G P +GE T +Y F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 62 WYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP-LGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYAT 272 The following BLAST results are available for this feature:
BLAST of EY661026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661026 ID=EY661026; Name=EY661026; organism=Citrus sinensis; type=EST; length=918bpback to top |