EY661026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 5.948e-96 Identity = 182/247 (73.68%), Postives = 199/247 (80.57%), Query Frame = 2 Query: 101 LRATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGTTLYLVAIF*SP-WXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXEPPXT-LETXXA-TCWGYAT 832 ++ATPFLGQ++ AN L+DVV MG+A++TM N+LWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGCI PEVLEKW++VDFKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVL FQVVLMGLVEGFRINGLPGVGEG LY + P +EIKNGRLAMFSM FF AIVTGKGP E L+ A W YAT Sbjct: 14 VKATPFLGQTKN-ANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYAT 259
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 1.087e-89 Identity = 169/227 (74.45%), Postives = 183/227 (80.62%), Query Frame = 2 Query: 110 TPFL-GQSRT-TANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEGTTLYLVAIF*SPWXC**SCYVC*N-SGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE 781 TPFL GQ R +A+ L+D+ N + TMGN+LWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGC+ PEVL+KW+ V+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVL FQV+LMGLVEGFRINGL GVGEG LY + P +EIKNGRLAMFSM FF AIVTGKGP E Sbjct: 17 TPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 243
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.803e-68 Identity = 146/252 (57.94%), Postives = 163/252 (64.68%), Query Frame = 2 Query: 104 RATPFLGQSRTTANALKDV------VPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXEP--PXTLETXXATCWGYAT 832 + T FLG + ++ V + M + +WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+ QVVLMG VEG+R+ G P +GEG +Y F +E+KNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 8 QTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGP-LGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYAT 257
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.803e-68 Identity = 146/252 (57.94%), Postives = 163/252 (64.68%), Query Frame = 2 Query: 104 RATPFLGQSRTTANALKDV------VPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXEP--PXTLETXXATCWGYAT 832 + T FLG + ++ V + M + +WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+ QVVLMG VEG+R+ G P +GEG +Y F +E+KNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 8 QTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGP-LGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYAT 257
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.401e-67 Identity = 146/256 (57.03%), Postives = 167/256 (65.23%), Query Frame = 2 Query: 101 LRATPFLGQS--RTTANALKDVVPMGNAKYTMGN-------ELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 ++ + F+GQ+ ++ ++ V G + TM +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+ QVVLMG VEG+R+ G P +GEG +Y F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 6 IQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP-LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYAT 259
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.401e-67 Identity = 139/214 (64.95%), Postives = 151/214 (70.56%), Query Frame = 2 Query: 200 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXEP--PXTLETXXATCWGYAT 832 +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILAV QVVLMGL+EG+R+ G P +GEG +Y F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 48 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP-LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYAT 259
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 7.577e-67 Identity = 139/214 (64.95%), Postives = 151/214 (70.56%), Query Frame = 2 Query: 200 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 +WYG DR K+LGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCI PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+ QVVLMGL+EG+R+ G P +GEG LY F +EIKNGRLAMFSM FF AIVTGKGP E + W +AT Sbjct: 47 IWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSK-NGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGP-LGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFAT 258
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 9.896e-67 Identity = 138/214 (64.49%), Postives = 150/214 (70.09%), Query Frame = 2 Query: 200 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXE--PPXTLETXXATCWGYAT 832 +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+R+ G P +GEG +Y F +EIKNGRLAMFSM FF AIVTGKGP E + W YAT Sbjct: 20 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGP-LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYAT 231
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 9.896e-67 Identity = 140/231 (60.61%), Postives = 156/231 (67.53%), Query Frame = 2 Query: 170 GNAKYTMGN-------ELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXEP--PXTLETXXATCWGYAT 832 G A++TM +WYGPDR KYLGPFS Q PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC PE+LEK V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+R+ G P +GEG LY F +E+KNGRLAMFSM FF AIVTGKGP + + W +AT Sbjct: 31 GQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEK-NGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGP-LGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFAT 259
BLAST of EY661026 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.688e-66 Identity = 143/256 (55.86%), Postives = 166/256 (64.84%), Query Frame = 2 Query: 101 LRATPFLGQS--RTTANALKDVVPMGNAKYTMGN-------ELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLXFQVVLMGLVEGFRINGLPGVGEG-TTLYLVAIF*SPWXC**SCYVC*NSGEEIKNGRLAMFSMLXFFXXAIVTGKGPXEP--PXTLETXXATCWGYAT 832 ++ + F GQ+ ++ ++ + G + TM +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+R+ G P +GEG +Y F +EIKNGRLAMFSM FF AIVTGKGP E + W +AT Sbjct: 6 IQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP-LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFAT 259 The following BLAST results are available for this feature:
BLAST of EY661026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661026 ID=EY661026; Name=EY661026; organism=Citrus sinensis; type=EST; length=918bpback to top |