EY660028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.579e-11 Identity = 39/110 (35.45%), Postives = 54/110 (49.09%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 P +L G P DYG+D GL DP ++RE E+IH RWAM +G + A +GI WF+AGA +P + S ++ Q++LMG VE R Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 26.1794 bits (56), Expect = 1.579e-11 Identity = 17/48 (35.42%), Postives = 21/48 (43.75%), Query Frame = 2 Query: 626 PGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 P G+ DPL G+F D KV EI GRL M ++ F Sbjct: 182 PLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.579e-11 Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVE 519 P +L G PGDYG+D GL DP ++RE E+IH RWA+A +G + A +G+ WF+AG+ +P + S ++ Q++LMG VE Sbjct: 65 PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVE 171 HSP 2 Score: 28.1054 bits (61), Expect = 1.579e-11 Identity = 17/46 (36.96%), Postives = 22/46 (47.83%), Query Frame = 2 Query: 632 GKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 G+ DPL L G+F D + KV EI GRL M ++ F Sbjct: 181 GEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGF 226
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.581e-11 Identity = 38/110 (34.55%), Postives = 51/110 (46.36%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 P +L G PGDYG+D GL DP R+RE ELIH RWAM +G G + WF+AGA +P + + + Q++LMG +E R Sbjct: 54 PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR 163 HSP 2 Score: 22.3274 bits (46), Expect = 1.581e-11 Identity = 20/49 (40.82%), Postives = 23/49 (46.94%), Query Frame = 2 Query: 623 YPGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 YPG + FDPL LA PDT KV EI GRL ++ F Sbjct: 177 YPG-ESFDPLGLADD-------PDTFA--ELKVKEIKNGRLASFSMFGF 215
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.050e-11 Identity = 36/111 (32.43%), Postives = 52/111 (46.85%), Query Frame = 1 Query: 253 NPEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 +P +L G PGDYG+D GL DP ++RE E+IH RWAM +G G + WF+ G+ +P + S ++ Q++LMG VE R Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 26.1794 bits (56), Expect = 2.050e-11 Identity = 20/49 (40.82%), Postives = 22/49 (44.90%), Query Frame = 2 Query: 623 YPGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 YPGG F DPL LA D KV EI GRL M ++ F Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 3.454e-11 Identity = 37/111 (33.33%), Postives = 53/111 (47.75%), Query Frame = 1 Query: 253 NPEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 +P +L G PGDYG+D GL DP ++RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 23.8682 bits (50), Expect = 3.454e-11 Identity = 16/48 (33.33%), Postives = 20/48 (41.67%), Query Frame = 2 Query: 626 PGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 P G+ DPL G+F D KV I GRL M ++ F Sbjct: 182 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGF 229
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.479e-11 Identity = 36/110 (32.73%), Postives = 51/110 (46.36%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 P +L G PGDYG+D GL DP ++RE E+IH WAM +G G + WF+AG+ +P + S ++ Q++LMG VE R Sbjct: 7 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 116 HSP 2 Score: 25.409 bits (54), Expect = 3.479e-11 Identity = 19/49 (38.78%), Postives = 22/49 (44.90%), Query Frame = 2 Query: 623 YPGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 YPGG F DPL LA D KV E+ GRL M ++ F Sbjct: 130 YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGF 168
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11 Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGI--------FVGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 PE+L G PGDYG+D GL DP R+RE ELIH RWA+ +GI + G + WF+AGA + I S + L Q++LMG E+ R Sbjct: 51 PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR 161
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 5.821e-11 Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 P +L G PGDYG+D GL DPA ++R+ E+IH RW M +G G + WF+AG+ +P + S ++ Q++LMG VE R Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 176 HSP 2 Score: 24.6386 bits (52), Expect = 5.821e-11 Identity = 16/48 (33.33%), Postives = 21/48 (43.75%), Query Frame = 2 Query: 626 PGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 P G+ DPL G+F D +V EI GRL M ++ F Sbjct: 181 PLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGF 228
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 7.556e-11 Identity = 36/110 (32.73%), Postives = 51/110 (46.36%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 P +L G PGDYG+D L DP ++RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R Sbjct: 68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 26.1794 bits (56), Expect = 7.556e-11 Identity = 20/49 (40.82%), Postives = 22/49 (44.90%), Query Frame = 2 Query: 623 YPGGKFFDPLCLAGTFKDGVYFPDTXKLDRFKVAEI*PGRLGMVALVIF 769 YPGG F DPL LA D KV EI GRL M ++ F Sbjct: 191 YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGF 229
BLAST of EY660028 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 39/110 (35.45%), Postives = 53/110 (48.18%), Query Frame = 1 Query: 256 PEWLDGSLPGDYGFDPLGLGKDPAFLTRHREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 528 P +L G PGDYG+D GL DP R+RE E+IH RWAM +G G + WF+AGA +P + S ++ Q++LMG+VE R Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR 173 The following BLAST results are available for this feature:
BLAST of EY660028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660028 ID=EY660028; Name=EY660028; organism=Citrus sinensis; type=EST; length=927bpback to top |