EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HERAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Herminiimonas arsenicoxydans GN=sucC PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.040e-40 Identity = 79/196 (40.31%), Postives = 110/196 (56.12%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K VV QI AGGRG G GGV + K +EV + +LG LVT QTGP+G++V ++ + E + E+Y +++DR + ++ S+GG IE +AE P I KV ID F G+ D +A D +A K+ +I Q + LYK F E+D +L EINPL T ++VA DAK NFD NA +R Sbjct: 41 KVWVVKAQIHAGGRGKG-------GGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYVGMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPFKGLLDSEA----DDIARKIGVPEGSIPQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIVALDAKFNFDSNALYR 225 HSP 2 Score: 60.077 bits (144), Expect = 2.040e-40 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP + A K D+ YI LDG IGC+VNGAGLA+ATMD+ K G Sbjct: 237 EEDPAEIEASKFDLTYISLDGNIGCLVNGAGLAMATMDVIKLYGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHOP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.657e-40 Identity = 77/192 (40.10%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK +G KGGV + K +EV+ + +ML LVT QTGP GK V+++Y+ E + E Y ++++DR T+ + ++GG SIED+A P IV +D GI V + L K A V KLY F D +LEINPL T L DAK++FD N+ +R Sbjct: 44 VVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKTYAEQMLHATLVTVQTGPAGKQVNRLYIEEGSEIDKEFYLSLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPATGIMSHHGRAVANALGLKGDQAKQAESLVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNSLYR 235 HSP 2 Score: 61.6178 bits (148), Expect = 2.657e-40 Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGLLP 765 +++D + + A K D+NY+ LDG IGCMVNGAGLA+ATMDI K + G+ P Sbjct: 246 SEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIK-LYGMTP 293
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BURCM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=sucC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.658e-40 Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K E+V + + ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + +++A DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFR 225 HSP 2 Score: 58.151 bits (139), Expect = 2.658e-40 Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP + A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BURA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia ambifaria (strain MC40-6) GN=sucC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.658e-40 Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K E+V + + ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + +++A DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVIALDAKFNFDSNALFR 225 HSP 2 Score: 58.151 bits (139), Expect = 2.658e-40 Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP + A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_OLICO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=sucC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.934e-40 Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK +G KGGV + K +EV+ +MLG+ LVT QTGP GK V+++YL E + E Y + ++DR+T+ + ++GG IE +A P IV +D GI KV L K A + V +LY F D ++LEINPL + +L DAK++FD NA +R Sbjct: 44 VVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFVDQMLGKTLVTVQTGPAGKQVNRLYLEEGADIDKEFYLSALVDRETSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPATGIMPHHGRKVAQALKLKGDQAKQAEKLVNQLYTAFIAKDMSMLEINPLILSKQGELRCLDAKISFDSNAIYR 235 HSP 2 Score: 58.9214 bits (141), Expect = 2.934e-40 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 T++D + + A K D+ YI LDG IGCMVNGAGLA+AT+DI K Sbjct: 246 TEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIK 287 HSP 3 Score: 21.557 bits (44), Expect = 2.934e-40 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 776 VGGNASEGQVXGGFKL 823 VGG ASE +V FK+ Sbjct: 299 VGGGASEEKVTAAFKI 314
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHOPB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=sucC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.462e-40 Identity = 75/192 (39.06%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK +G KGGV + K EEV+ + +MLG LVT QTGP GK V+++Y+ + + E Y ++++DR T+ + ++GG +IED+A P I+ +D GI V L A V +LY F D +LEINPL T +L DAK++FD NA +R Sbjct: 44 VVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIEEVKQYAAEMLGATLVTIQTGPAGKQVNRLYIEDGSDIEKEFYLSLLVDRVTSRISFVVSTEGGMNIEDVAHDTPEKIISFSVDPATGIMGHHGRTVAKALGLTGDLAKQAERLVAQLYAAFISKDMEMLEINPLVVTKQGELKCLDAKMSFDGNALYR 235 HSP 2 Score: 63.1586 bits (152), Expect = 3.462e-40 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGLLP 765 T++D + + A K D+NY+ LDG IGCMVNGAGLA+ATMDI K + G+ P Sbjct: 246 TEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIK-LYGMTP 293
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BDEBA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bdellovibrio bacteriovorus GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.464e-40 Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K +EV + + KM+G LVT QTGP+GK+V KV++ + ++ E Y A ++DR T ++ S+GG IE++AE P+ I KV ID G+ A ++ + + A N A++ LY F +DC++ EINPL T ++ DAK+NFD N+ FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKSLDEVSEFTKKMIGMTLVTHQTGPEGKVVQKVFIEQGCNIAKEYYVACLIDRATGRAAMMASSEGGMDIEEVAEHNPDAIKKVDIDPTVGLMPFQARELAFQIGMEPAIVNKAVKFFAGLYNAFVATDCSIAEINPLVVTKEGDVLCLDAKMNFDSNSLFR 225 HSP 2 Score: 54.299 bits (129), Expect = 3.464e-40 Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++P + A K D+ +I LDG IGC+VNGAGLA+AT+DI K Sbjct: 237 EEEPSEIEASKFDLAFIKLDGNIGCLVNGAGLAMATLDIIK 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RICTY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia typhi GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-40 Identity = 79/192 (41.15%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K VV QI AGGRG GGV +VK KEE + ++ M G LVT QTGPQG+ V+ +Y+ ++ E YF+I+ DR + I ++GG IE +AEK P I+K +D G+ D + GL K + E VK +Y F E+D T +EINPL S K L+A DAK+ FDDN F+ Sbjct: 41 KVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNHLYIESGCDILKEYYFSIVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYGLGFKDSQAKQMKEIVKSVYNAFIETDATQIEINPLIINSYKNLLALDAKITFDDNGLFK 225 HSP 2 Score: 55.0694 bits (131), Expect = 3.464e-40 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 ++DP A A ++Y+ +DG IGCMVNGAGLA+ATMDI K Sbjct: 237 EEDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIK 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BACWK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus weihenstephanensis (strain KBAB4) GN=sucC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.464e-40 Identity = 74/189 (39.15%), Postives = 104/189 (55.03%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG GGV + K EEV + +LG LVT QTGP+GK V ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A++ + LY F E DC++ EINPL T +++A DAKLNFD NA +R Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYR 225 HSP 2 Score: 62.3882 bits (150), Expect = 3.464e-40 Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++D + + A K D+NYI LDG IGCMVNGAGLA+ATMDI K+ G Sbjct: 237 EEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BURTA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=sucC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.512e-40 Identity = 74/189 (39.15%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K ++V + + ++LG L T QTGP+G+ V+++ + E + E+Y I++DR + +++ S+GG IE++AEK P I KV ++ G+ D +A + + A A E +K LYK F E+D +L EINPL T +++A DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKSLDQVREYANQILGMQLKTHQTGPEGQKVNRLLIEEGADIKKELYVGIVIDRVSQKVVVMASSEGGMDIEEVAEKTPEAIHKVAVEPSTGLQDAEADDLAKKIGVPDASIPQAREILKGLYKSFWETDASLAEINPLVLTGDGKVIALDAKFNFDSNALFR 225 HSP 2 Score: 58.151 bits (139), Expect = 4.512e-40 Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP + A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |