EY659243
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB_ORYSJ (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.896e-90 Identity = 179/271 (66.05%), Postives = 208/271 (76.75%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGE------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812
KE+VV QILAGGRGLGTFKSGL+GGVHIVK EE E L+ KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAI LDR TAGP+II CSKGGTSIEDLAEKYP+MI+KVPIDVF GITD+DAAKVVDGLAPK ADR +IEQ+KKLY+LFC+SDCTLLEINPLA+T+ +LVAADAKLNFDDNAAFRQ + + + + L+++G L GE ++ I++HGGT A L++GG + + VE
Sbjct: 70 KEIVVKSQILAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVVDGLAPKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQ-KEIFAMRDTTQEDPREVAAAKADLNYIG----LDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 335
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB_ARATH (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 2.096e-89 Identity = 176/273 (64.47%), Postives = 212/273 (77.66%), Query Frame = 3 Query: 12 DHKELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGE------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812
+ ELVV QILAGGRGLGTFKSGLKGGVHIVK++E E+++GKMLGQ+LVTKQTGPQGK+VSKVYLCEKLSLVNEMYF+I+LDRK+AGP+II C KGGTSIEDLAEK+P+MI+KVPIDVF GITDEDAAKVVDGLAPK ADR D+IEQVKKLY+LF ++DCT+LEINPLA+TS QLVAADAKLNFDDNAAFRQ + + + + L+++G L GE ++ I++HGGT A L++GG + + VE
Sbjct: 67 NESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQ-KEVFAMRDPTQEDPREVAAAKVDLNYIG----LDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVE 334
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB1_DICDI (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsC PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.265e-60 Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 3 Query: 6 VRDHKELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
V + ++LVV Q+LAGGRG G F SGLKGGV + E+V+ + KMLG LVTKQTG GK+V +VY+ E+ L EMYFAI++DRK GP+++ +GG IE +A P+ I K PID+ G+ E ++ + L + + A +Q+KKLY F ++DCTL+EINPLA+T+ ++ DAKLNFDDNAAFR
Sbjct: 71 VMNTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFR 266 HSP 2 Score: 65.4698 bits (158), Expect = 3.265e-60 Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
+Q+DPR V A + D+NYIGLDG IGC+VNGAGLA+A+MDI K G
Sbjct: 277 SQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGG 322
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_AKKM8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.216e-57 Identity = 90/191 (47.12%), Postives = 122/191 (63.87%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590
+ VV Q+ AGGRG GTFK+G KGGVH+VK EEVE+++GKML Q+LVTKQTG GK+VSK+ + E + L E YFAI+ DR P+I+ ++GG IE++A P I++ I+ GI A K+ L A + + +YKLF DC+L+EINPL T+ ++ A DAK NFDDNA +R
Sbjct: 42 QYVVKAQVHAGGRGKGTFKNGFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFAILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDAKFNFDDNALYR 232 HSP 2 Score: 73.559 bits (179), Expect = 4.216e-57 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756
T++DPR V A K D+NYIGLDG IGCMVNGAGLA+ATMDI KY G
Sbjct: 243 TEEDPREVEAGKYDLNYIGLDGNIGCMVNGAGLAMATMDIIKYYGG 288
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB1_PIG (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 2.069e-56 Identity = 92/195 (47.18%), Postives = 131/195 (67.18%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
K++V+ Q+LAGGRG GTF+SGLKGGV IV EE + +S +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P IVK PID+ GI E A ++ G P + D A E + KLY LF + D T++EINP+ + S ++ DAK+NFD N+A+RQ
Sbjct: 55 KDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPPSIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQ 247 HSP 2 Score: 63.929 bits (154), Expect = 2.069e-56 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
TQ+D R A KA++NYIGLDG IGC+VNGAGLA+ATMDI K
Sbjct: 257 TQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIK 298
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 1.323e-55 Identity = 91/195 (46.67%), Postives = 130/195 (66.67%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
K++V+ Q+LAGGRG GTF SGLKGGV IV EE + +S +M+GQ L+TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG ++GG +IED+A + P IVK PID+ GI E A + G + D A E + KLY LF + D T++EINP+ + S +++ DAK+NFD N+A+RQ
Sbjct: 93 KDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQ 285 HSP 2 Score: 63.5438 bits (153), Expect = 1.323e-55 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
+Q+D R A ADINYIGLDG IGC+VNGAGLA+ATMDI K
Sbjct: 295 SQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIK 336
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 2.248e-55 Identity = 90/195 (46.15%), Postives = 130/195 (66.67%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
K++V+ Q+LAGGRG GTF+SGLKGGV IV EE + +S +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P I+K PID+ GI E A ++ G P + + A E + KLY LF + D T++EINP+ + S ++ DAK+NFD N+A+RQ
Sbjct: 93 KDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQ 285 HSP 2 Score: 63.929 bits (154), Expect = 2.248e-55 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
TQ+D R A KA++NYIGLDG IGC+VNGAGLA+ATMDI K
Sbjct: 295 TQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIK 336
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.248e-55 Identity = 88/193 (45.60%), Postives = 128/193 (66.32%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
K++V+ Q+LAGGRG GTF+SGLKGGV IV EE + +S +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P IVK PID+ GI E A ++ + + + A E + KLY F + D T++EINP+ + S ++ DAK+NFD N+A+RQ
Sbjct: 93 KDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQ 285 HSP 2 Score: 65.855 bits (159), Expect = 2.248e-55 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
TQ+D R A KAD+NYIGLDG IGC+VNGAGLA+ATMDI K
Sbjct: 295 TQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIK 336
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB2_DICDI (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.500e-55 Identity = 91/193 (47.15%), Postives = 126/193 (65.28%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
ELVV Q+ AGGRG G+F ++G KGGVH+ K +E E L +MLG+ LVTKQT +G V V L E + E+YFAI++DRK GP++I +GG IE +AE+ P++I K PID+ GI E + + L A +Q++ LY+LF +SD T +EINP A+T+ Q++ DAK+NFDDNA+FRQ
Sbjct: 67 ELVVKAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEKLGFTGEKAKIAQQQMENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQ 259 HSP 2 Score: 66.6254 bits (161), Expect = 6.500e-55 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGL 759
++DPR V A K +NYIGLDG IGCMVNGAGLA+ATMDI K G+
Sbjct: 270 EEDPREVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGI 315
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCB_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Neurospora crassa GN=B9J10.140 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.104e-54 Identity = 86/193 (44.56%), Postives = 127/193 (65.80%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593
+++V+ Q+LAGGRG GTF +GLKGGV ++ E + + +M+G L+TKQTG QG++ S VY+CE+ E Y A+++DR + GP+I+ S+GG IE +A++ P I ID+ G+TDE A + L +A + ++KLYK+FCE D T +EINPL++TS +++A DAK FDDNA FRQ
Sbjct: 77 EDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFSEQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADFRQ 269 HSP 2 Score: 61.2326 bits (147), Expect = 1.104e-54 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744
TQ+DP V A +A +N+I LDG+IGC+VNGAGLA+ATMDI K
Sbjct: 279 TQEDPDEVRAAQAGLNFIKLDGDIGCLVNGAGLAMATMDIIK 320 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |