EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SALTO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=sucC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.889e-27 Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + + EE + +LG + +G V KV + + E YF+ +LDR + I GG IE +A + P +VK PID G+ A ++V G +VAD+ +E L+K F D TL+E+NPLAKT+ L+ DAK++ D+NAAFR Sbjct: 42 VVVKAQVKVGGRGKA-------GGVKLTEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYFSYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKEPIDANTGVDVATARRIVTQAGFPAEVADQT--VEIAVDLWKAFVAEDATLVEVNPLAKTAEGGLLLLDAKVSLDENAAFR 217 HSP 2 Score: 48.1358 bits (113), Expect = 1.889e-27 Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP AA + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ARTCA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=sucC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.460e-27 Identity = 61/193 (31.61%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRY 602 VV Q+ GGRG GGV + K +E + S +LG + +G V+KV + + + E YF+++LDR + + +GG IE LA + P + K+ ID GI A ++V R + + KL+ +F + D TL+E+NPL KT +VA D K++ D+NA FR ++ Sbjct: 43 VVKAQVKVGGRGKA-------GGVKVAKSADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYFSVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFAEELRGKVADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVSLDENAEFRHAKH 221 HSP 2 Score: 46.2098 bits (108), Expect = 2.460e-27 Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLEAKAKAQDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PROAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Propionibacterium acnes GN=sucC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.425e-27 Identity = 60/191 (31.41%), Postives = 101/191 (52.88%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + V Q+ GGRG GGV I K E + + +LG + +G V KV + E + E YF+I+LDR + + +GG IE LA++ P + KVP+D +G+ D A +++ ++++ + V KL++ + + D TL+E+NP+ KT +++A D K+ D+NA+FRQ Sbjct: 43 VAVKAQVKVGGRGKA-------GGVKIAKSAAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQ 219 HSP 2 Score: 41.2022 bits (95), Expect = 5.425e-27 Identity = 17/40 (42.50%), Postives = 26/40 (65.00%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + +NY+ LDG +G + NGAGL ++T+D Y Sbjct: 232 DPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDCVAY 271
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC2_STRCO (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Streptomyces coelicolor GN=sucC2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.065e-27 Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRY 602 VV Q+ GGRG GGV + E E+ + +LG + +G V V L E + E Y + +LDR + G + I ++GGT IE++A + P + ++P+D G+ A ++ D GL P+ D + +L+K+ D L+E+NPL +T+ ++VA D K+ DDNA FRQ R+ Sbjct: 43 VVKAQVKTGGRGKA-------GGVRLAADPAEAEEAARHILGMDI-------RGHTVDTVMLAEPCEIEREFYVSYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLPPQTVD------TLVRLWKVLVREDALLVEVNPLVRTAEGRIVALDGKVTLDDNARFRQSRW 217 HSP 2 Score: 38.5058 bits (88), Expect = 7.065e-27 Identity = 14/26 (53.85%), Postives = 22/26 (84.62%), Query Frame = 1 Query: 661 INYIGLDGEIGCMVNGAGLALATMDI 738 +NY+ LDGE+G + NGAGL ++T+D+ Sbjct: 237 LNYVKLDGEVGVIGNGAGLVMSTLDV 262
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SALAI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinispora arenicola (strain CNS-205) GN=sucC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.197e-26 Identity = 64/192 (33.33%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + + +E + +LG + +G V KV + + E YF+ +LDR + I GG IE +A + P +VK PID G+ A +++ G +V D+ A+E L+K F D TL+E+NPLA+T L+ DAK++ D+NAAFR Sbjct: 42 VVVKAQVKVGGRGKA-------GGVKLAEGADETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYFSYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKAPIDANTGVDAAMARQIITRAGFPAEVVDQ--AVEVAVDLWKAFVAEDATLVEVNPLARTGQGGLLLLDAKVSLDENAAFR 217 HSP 2 Score: 48.1358 bits (113), Expect = 1.197e-26 Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP AA + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLEQAAKEKDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PYRCJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=sucC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.640e-26 Identity = 62/192 (32.29%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +V+ Q++ GRG GG+ + K+ EE +LS +M G + +G V K+Y+ + L + EMY ++++DR T + + GG IE++A+ P I +V +D F G+ D +V G +P A A V+ +YK+ + D L+E NPLA T +V DA++ DDNA FR Sbjct: 42 VVLKAQVVVAGRGKA-------GGIKVAKRVEEAYELSKQMFGMNI-------KGLTVRKLYVTKYLEVEREMYLSLIIDRATRRFLFLASPVGGMDIEEIAKTTPEKIKRVYVDPFVGLRDYHVRSIVSWLGFSPGTAQWQQAASIVQAMYKIAVDYDAELVESNPLALTKEGDVVPLDARVIVDDNALFR 219 HSP 2 Score: 42.3578 bits (98), Expect = 2.640e-26 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 622 QDDPRYVA-----ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DPR + A K +Y+ LDG+IG + NGAGL +ATMD+ + G Sbjct: 228 EEDPRDITEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFGG 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=sucC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.436e-26 Identity = 59/191 (30.89%), Postives = 98/191 (51.31%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK-KLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + + E E ++G++LG + +G V KV + E +S E+Y + +LDR + +I ++GG IE++A+ P+ IVK+ G+ D A ++ + + + Q+ LY+ F ESD +L EINPL + L+A D+K+ D++ FR Sbjct: 42 VVVKAQVHVGGRGKA-------GGVKLAQTPAEAEQVAGQILGMNI-------KGLTVEKVLVAEAISYERELYLSAILDRGSKRITMIASAEGGVEIEEVAKTNPSAIVKIAAHPTMGLLDFQARELAFRIGLRDGKQARQFAQIAGALYRAFVESDASLAEINPLVIKNDGNLLALDSKVLLDESGLFR 218 HSP 2 Score: 53.5286 bits (127), Expect = 3.436e-26 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A +ADI +I LDG IGCMVNGAGLA+ATMD+ K G Sbjct: 238 AREADITFIKLDGNIGCMVNGAGLAMATMDVIKLSGG 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CHLSY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.437e-26 Identity = 58/191 (30.37%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + + E E ++ ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ + + Q+ LY+ F E D +L+EINPL + L+A D+K+ D++A FR Sbjct: 42 VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLNDGKQARQFAQIASALYRAFVECDASLVEINPLVVKADGSLLALDSKILLDESALFR 218 HSP 2 Score: 52.373 bits (124), Expect = 3.437e-26 Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A +A I YI LDG IGCMVNGAGLA+ATMD+ K G Sbjct: 238 AREAGITYIKLDGNIGCMVNGAGLAMATMDVIKLSGG 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.437e-26 Identity = 58/191 (30.37%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + + E E ++ ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ + + Q+ LY+ F E D +L+EINPL + L+A D+K+ D++A FR Sbjct: 42 VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLNDGKQARQFAQIASALYRAFVECDASLVEINPLVVKADGSLLALDSKILLDESALFR 218 HSP 2 Score: 52.373 bits (124), Expect = 3.437e-26 Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A +A I YI LDG IGCMVNGAGLA+ATMD+ K G Sbjct: 238 AREAGITYIKLDGNIGCMVNGAGLAMATMDVIKLSGG 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_METJA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanocaldococcus jannaschii GN=sucC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.827e-26 Identity = 69/191 (36.13%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 KE+V+ Q+L GGRG K+G G + KEE + ++ + + +G+ V K+ + EKL + E Y +I++DR P+II ++GG IE++AEK P I+K IDV A +V + + + KLYK+F E D T++EINPL T + AADA L+ DD+AAFR Sbjct: 38 KEVVLKAQVLVGGRG----KAG--GILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKEAKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFR 215 HSP 2 Score: 35.8094 bits (81), Expect = 5.827e-26 Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 1 Query: 637 YVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 Y +K Y+ LDG++ + NGAGL LA+MDI Sbjct: 224 YKNKEKLPFAYVELDGDVAVIGNGAGLTLASMDI 257 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |