EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ROSCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=sucC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.864e-26 Identity = 57/191 (29.84%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + E+ E ++G++LG + +G V KV + E ++ E+Y ++DR + +++ ++GG IE++A P IVKV G+ D A + G+ A + Q+ LY+ + + D +L EINPL + L A D+K+ DD+ FR Sbjct: 42 VVVKAQVFVGGRGKA-------GGVKLADTPEQAEQVAGQILGMNI-------KGLTVEKVLVAEAITYEREIYLGAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMLGLLDFQARDLAYGIGLTDAKQARQFAQIATALYRAYMDVDASLAEINPLVVRADGSLQALDSKIVLDDSGLFR 218 HSP 2 Score: 53.1434 bits (126), Expect = 9.864e-26 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A +A I YI LDG+IGCMVNGAGLA+ATMD+ K G Sbjct: 238 AREAGITYIKLDGDIGCMVNGAGLAMATMDVIKLYGG 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC1_STRCO (Succinyl-CoA ligase [ADP-forming] subunit beta-1 OS=Streptomyces coelicolor GN=sucC1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.173e-25 Identity = 63/192 (32.81%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV Q+ GGRG GGV + +E + +LG + +G V KV + E +V E Y + +LDR + I +GG IE++A P + K PID +G+T E A ++V+ +VAD+ + + KL+ F + D L+E+NPLAK ++A D K++ DDNA FR Sbjct: 43 VVKAQVKVGGRGKA-------GGVKLAASADEAVARATDILGMDI-------KGHTVHKVMIAETAPEIVEEYYVSFLLDRANRTFLSIASVEGGVEIEEVAATRPEAVAKTPIDAIDGVTPEKAREIVEAAKFPAEVADK--VADILVKLWDTFIKEDALLVEVNPLAKVVSGDVIALDGKVSLDDNAEFR 218 HSP 2 Score: 45.0542 bits (105), Expect = 2.173e-25 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 +P AA + ++NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 232 NPLEAAAKEKNLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 271
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHOSR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodococcus sp. (strain RHA1) GN=sucC PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.174e-25 Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 K ++V Q+ GGRG GGV + + + + + + +G +V K+ + E + E Y + +LDR + + +GG IE AE+ P+ + K+P+D G+ A + + L +V D A ++KL+++F D L+E+NPL +T Q++A D K+ D+NAAFRQ Sbjct: 40 KPVMVKAQVKVGGRGKA-------GGVKYSADADAAQANAEAILGLDI------KGHVVKKLLVAEASDIAEEYYISFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLPAEVLDA--AAVTIQKLWEVFINEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQ 218 HSP 2 Score: 46.9802 bits (110), Expect = 2.174e-25 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHOOB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodococcus opacus (strain B4) GN=sucC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.682e-25 Identity = 55/194 (28.35%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 K ++V Q+ GGRG GGV + + + + + + +G +V K+ + E + E Y + +LDR + + +GG IE AE+ P+ + K+P+D G+ A + + L +V D A ++KL+++F + D L+E+NPL +T +++A D K+ D+NAAFRQ Sbjct: 40 KPVMVKAQVKVGGRGKA-------GGVKYSADVDAAQANAEAILGLDI------KGHVVKKLLVAEASDIAEEYYISFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLPAEVLDA--AAVTIQKLWEVFIKEDALLVEVNPLVRTPNDEILALDGKVTLDENAAFRQ 218 HSP 2 Score: 46.9802 bits (110), Expect = 3.682e-25 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RHOE4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=sucC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.793e-25 Identity = 58/195 (29.74%), Postives = 93/195 (47.69%), Query Frame = 3 Query: 18 KELVVNIQILAGGRG-LGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 K ++V Q+ GGRG G K + E + L K G +V K+ + E + E Y + +LDR + + +GG IE AE+ P+ + K+P+D G+ A + + L +V D A ++KL+++F D L+E+NPL +T Q++A D K+ D+NAAFRQ Sbjct: 40 KPVMVKAQVKVGGRGKAGGVKYSPDVDAAVANAEAILGLDIK--------------GHVVKKLLVAEASDIAEEYYISFLLDRTNRTYLAMCSVEGGVEIEVTAEENPDALAKIPVDAVKGVDLAFARSIAEAGKLPAEVLDA--AAVTIQKLWEVFINEDALLVEVNPLVRTPDDQILALDGKVTLDENAAFRQ 218 HSP 2 Score: 46.9802 bits (110), Expect = 4.793e-25 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HALMA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haloarcula marismortui GN=sucC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.794e-25 Identity = 68/193 (35.23%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + + Q+ GGRG GG+ +V+ KEE + + ++G L +G VSKV + E + VNE+Y + +DR P+ + +KGG +IE++AE+ P+ I + ID G+ A KVV G+ +VA ND + LY+L+ + D EINPL TS +++AADA +N D +A FRQ Sbjct: 42 VAIKAQVHVGGRGKA-------GGIKLVESKEEAREAAEDIIGMDL-------KGYHVSKVLVEEAVDFVNELYVGVTMDRGEGRPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKVVYEAGVDREVA--NDVASVLTTLYQLWDDRDGADTEINPLMITSDDEVIAADAVMNVDGDALFRQ 218 HSP 2 Score: 38.891 bits (89), Expect = 4.794e-25 Identity = 16/37 (43.24%), Postives = 24/37 (64.86%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 AD+ +Y+ LDG +G + NGAGL + T+D+ Y G Sbjct: 238 ADEYGFDYVRLDGNVGIIGNGAGLVMTTLDLVDYYDG 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCVP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=sucC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.238e-25 Identity = 60/194 (30.93%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 K ++V Q+ GGRG K+G G + E+ + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP+D G+ + A ++ + L +V D A + KL+++F + D TL+E+NPL +T Q++A D K+ D NA FRQ Sbjct: 40 KPVMVKAQVKVGGRG----KAG--GVKYAATPEDALTHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEAFAREIAEKGHLPAEVLDA--AAVTIAKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQ 218 HSP 2 Score: 44.669 bits (104), Expect = 6.238e-25 Identity = 18/40 (45.00%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG +G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGAVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-1 OS=Archaeoglobus fulgidus GN=sucC1 PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.239e-25 Identity = 61/190 (32.11%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV QIL GGRG GGV EE ++++ K+LG + +G V KV + E+L++ E Y ++D+ + P +I GG +E++A K+P+ I ++ D G+ D + K + + + + +KKL + + L EINPLA T + +AADA+LN DDNA +R Sbjct: 42 VVVKAQILVGGRGKA-------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYVGYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFEGEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVTD-EGFLAADARLNTDDNALYR 216 HSP 2 Score: 47.3654 bits (111), Expect = 6.239e-25 Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 T++DP A INY+ L G +G + NGAGLA+ATMDI M G Sbjct: 227 TEEDPLEREARLKGINYVHLGGNVGVIANGAGLAMATMDIINLMGG 272
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCA9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=sucC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 8.118e-25 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 K +++ Q+ GGRG K+G G + ++ + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE AE+ P+ + KVP+D G+ A ++ + + A ++KL+++F D TL+E+NPL +T Q++A D K+ D NA FRQ Sbjct: 40 KPVMIKAQVKVGGRG----KAG--GVKYAATPDDALTHAQNILGLDI-------KGHIVKKILVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGVEIEVTAEENPDALAKVPVDAVKGVDLALAREIAEKGKLPAEVLDSAAVTIQKLWEVFVGEDATLVEVNPLVRTPDNQILALDGKVTLDGNADFRQ 218 HSP 2 Score: 45.8246 bits (107), Expect = 8.118e-25 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCS2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium smegmatis GN=sucC PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 8.119e-25 Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + ++ + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P + KVP+D G+ A + + L +V D A ++KL+++F + D TL+E+NPL +T Q++A D K+ D+NA FRQ Sbjct: 40 RPVMVKAQVKTGGRG----KAG--GVKYAATPDDAFTHANNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLPAEVLDA--AAVTIQKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDENAGFRQ 218 HSP 2 Score: 45.8246 bits (107), Expect = 8.119e-25 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |