EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Archaeoglobus fulgidus GN=sucC2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.945e-24 Identity = 61/190 (32.11%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 ++V+ Q+L GGRG G+K + EE + + +M G +L +G IV K+Y+ E + + EMY + +DR G I S GG IE++A K+P I ++ ++ G+ D +++ + +K LY++ + L+EINPL T LVAADA+LN DD+A FR Sbjct: 41 KVVLKSQVLVGGRGKA---GGIKKAYSV---EEAVEKAKEMFGSVL-------KGHIVEKIYVEEMIEVQREMYAGLTIDRANKGIAAILSSVGGMDIEEIAVKHPEKIARIAVNPKWGLWDYQIRELLLNSQMPREYWKEVASILKTLYRIMVHYEAELVEINPLVVTP-DGLVAADARLNIDDSALFR 216 HSP 2 Score: 42.743 bits (99), Expect = 3.945e-24 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 1 Query: 625 DDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGLLP 765 D +A +K +NY+ LDG +G + NGAG+A+ATMD+ Y+ G P Sbjct: 230 DQMERIAMEKG-LNYVKLDGNVGVLANGAGMAMATMDLI-YIYGGKP 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_NOCFA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nocardia farcinica GN=sucC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.132e-24 Identity = 56/193 (29.02%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K +++ Q+ GGRG K+G G + E+ + +LG + +G I K+ + E + E Y + +LDR + + +GG IE++A P + KVP+D G+ A + + L +V D A ++KL+++F D TL+E+NPL +T +++A D K+ D+NA FR Sbjct: 40 KPVMIKSQVKVGGRG----KAG--GVKYAATPEDAFTHAQNILGLDI-------KGHITKKILVAEAKDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLPAEVLDA--AAVTIQKLWEVFVAEDATLVEVNPLVRTPQDEILALDGKVTLDENAGFR 217 HSP 2 Score: 46.9802 bits (110), Expect = 5.132e-24 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_GEMAT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=sucC PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.134e-24 Identity = 54/186 (29.03%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEV-EDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDN 578 ++V Q+ AGGRG GGV E ++ + +LG + + V KV + + +E Y I++DR T P+ + + GG IE++A P I+ P+D G+ +A ++ L V A + +++LY F + C++ EINPL T +L+A D K+ DDN Sbjct: 42 VMVKAQVHAGGRGKA-------GGVKFCPTPEAAKEKATAILGMTI-------KDLTVEKVLVTVAADIASEAYVGIIVDRATKKPVFMVSAAGGIDIEEVAATTPEKILYHPVDTRYGLLPFEAMRMGFFLYQDVKLARQAAKIMQQLYTAFMSAGCSIAEINPLVVTPQNELIAVDGKMVIDDN 213 HSP 2 Score: 53.5286 bits (127), Expect = 5.134e-24 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 + + P V A A++ +I LDG +GC+VNGAGLA+ATMD+ KY G Sbjct: 228 SSEAPSEVDARNANLTFIKLDGNVGCVVNGAGLAMATMDLVKYYGG 273
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_DESK1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=sucC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 8.694e-24 Identity = 56/189 (29.63%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +V+ Q+L GGRGL GGV E + L + + +G+ V K+ + E + + E+Y ++ +DR T + + GG IE+LA K+P+ I+++P+D F G + A + L + ++ +YK+ + D L+E NPLA T +L A DAK+ DDN+ +R Sbjct: 43 VVLKSQVLVGGRGLA-------GGVKKASNLEEALTKARELFSMSI------KGERVEKILVEEAVCISRELYMSLTVDRATRKLVYLASGMGGVEIEELARKHPDKILRIPVDPFIGYSGYMARHALGFLGLQWDKLGQLDNIMRAMYKIMIDYDAELVEFNPLAYTCDGRLTALDAKIIIDDNSLYR 218 HSP 2 Score: 42.3578 bits (98), Expect = 8.694e-24 Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 631 PRYVAADKADINYIGLDGEIGCMVNGAGLALATMD 735 P A + D NY+ LDG+IG + NGAGL +ATMD Sbjct: 232 PYEKVAKQLDFNYVELDGDIGVISNGAGLTMATMD 266
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_THISH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=sucC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.973e-24 Identity = 80/268 (29.85%), Postives = 128/268 (47.76%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGEWCRI-----SFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV +VK E+E G++LG L T QTGP G ++ V + + E+Y ++++DR I+ + GG IE +A + P I+ + +D G +V L + + ++ + +LY+LF +SD +L+EINPL T +L+A DAK+N DDN +R + R + ++ + H L + C + + I++HGG A L++GG AR E Sbjct: 44 VVKAQVHAGGRGKA-------GGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYLSLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLEGPQVSALVKLLGQLYRLFVDSDASLVEINPLVVTKTGELIALDAKINLDDNGLYRH----QALAELRDETQEDAREARAREHELNYVRLDGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVGGGTTAARVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PYRAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=sucC PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.131e-23 Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +V+ Q++ GRG GG+ + K EE +L+ KM G + +G +V K+Y+ + + + EMY ++++DR T + + GG IE++A+ P I +V +D G+ D +V G P+ A V+ +Y + + D L+E NPLA T ++ DA++ DDNA ++ Sbjct: 42 VVLKAQVVVAGRGKA-------GGIKVAKTPEEAYELATKMFGMNI-------KGLVVKKIYVTKYVEVEREMYLSLIIDRATRRYLFLASPIGGVDIEEIAKTQPEKIKRVYVDPSVGLRDYHVRSIVLWLGFKPETPQWRQASSIVQAMYNIMVDYDAELVESNPLAVTREGDVIPLDARVIVDDNALYK 219 HSP 2 Score: 42.743 bits (99), Expect = 1.131e-23 Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 622 QDDPRYVA-----ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DPR V+ A K +Y+ LDG++G + NGAGL +ATMD+ + G Sbjct: 228 EEDPRDVSEFEMYAKKIGFHYVELDGDVGIIGNGAGLTMATMDLVYHFGG 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCSS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium sp. (strain MCS) GN=sucC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.472e-23 Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K ++V Q+ GGRG K+G G + ++ + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P+ + ++P+D G+ + A ++ + L +V D A + KL+++F D TL+E+NPL +T Q++A D K+ D NA FR Sbjct: 40 KPVMVKAQVKVGGRG----KAG--GVKYAATADDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGVEIEEVAATKPDRLARIPVDATKGVDEAFAREIAEKGHLPAEVLDA--AAVTIAKLWEVFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFR 217 HSP 2 Score: 45.8246 bits (107), Expect = 1.472e-23 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium sp. (strain KMS) GN=sucC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.472e-23 Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K ++V Q+ GGRG K+G G + ++ + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P+ + ++P+D G+ + A ++ + L +V D A + KL+++F D TL+E+NPL +T Q++A D K+ D NA FR Sbjct: 40 KPVMVKAQVKVGGRG----KAG--GVKYAATADDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGVEIEEVAATKPDRLARIPVDATKGVDEAFAREIAEKGHLPAEVLDA--AAVTIAKLWEVFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFR 217 HSP 2 Score: 45.8246 bits (107), Expect = 1.472e-23 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCSJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium sp. (strain JLS) GN=sucC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.472e-23 Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K ++V Q+ GGRG K+G G + ++ + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P+ + ++P+D G+ + A ++ + L +V D A + KL+++F D TL+E+NPL +T Q++A D K+ D NA FR Sbjct: 40 KPVMVKAQVKVGGRG----KAG--GVKYAATADDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGVEIEEVAATKPDRLARIPVDATKGVDEAFAREIAEKGHLPAEVLDA--AAVTIAKLWEVFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFR 217 HSP 2 Score: 45.8246 bits (107), Expect = 1.472e-23 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRATW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=sucC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.531e-23 Identity = 81/271 (29.89%), Postives = 135/271 (49.82%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ + ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALKGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |